Pm022821 (Prunus mume)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08536 (Whirly) IPR013742 Pm022821 T350594_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm022821 Whirly 55 190

Links

Other Whirly family TFs
Other Prunus mume TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATWHY2 Arabidopsis lyrata scaffold_202038.1 N 0.757
WHY2 Arabidopsis thaliana AT1G71260 N 0.750
Bostr.10273s0220 Boechera stricta Bostr.10273s0220 N 0.721
PK20247.1 Cannabis sativa PK20247.1 N 0.728
Cagra.0147s0016 Capsella grandiflora Cagra.0147s0016 N 0.735
Carubv10020880m.g Capsella rubella Carubv10020880m.g N 0.743
evm.TU.supercontig_249.9 Carica papaya evm.TU.supercontig_249.9 N 0.713
orange1.1g026312m.g Citrus sinensis orange1.1g026312m.g N 0.701
Eucgr.K01091 Eucalyptus grandis Eucgr.K01091 N 0.801
Thhalv10019058m.g Eutrema salsugineum Thhalv10019058m.g N 0.757
GLYMA03G41270 Glycine max GLYMA03G41270 N 0.728
GLYMA19G43880 Glycine max GLYMA19G43880 N 0.735
MLOC_19666 Hordeum vulgare MLOC_19666 N 0.767
Lus10017892.g Linum usitatissimum Lus10017892.g N 0.721
Lus10035067.g Linum usitatissimum Lus10035067.g N 0.721
chr1.LjT14G19.90.nc Lotus japonicus chr1.LjT14G19.90.nc N 0.801
MDP0000168614 Malus domestica MDP0000168614 N 0.868
cassava24783.valid.m1 Manihot esculenta cassava24783.valid.m1 N 0.757
MTR_7g116270 Medicago truncatula MTR_7g116270 N 0.769
mgf015710m Mimulus guttatus mgf015710m N 0.772
ATWHY2 Populus trichocarpa POPTR_0003s04700 N 0.768
PRUPE_ppa011529mg Prunus persica PRUPE_ppa011529mg N 0.963
SapurV1A.0002s0060 Salix purpurea SapurV1A.0002s0060 N 0.757
Solyc11g044750.1 Solanum lycopersicum Solyc11g044750.1 N 0.728
PGSC0003DMG400022930 Solanum tuberosum PGSC0003DMG400022930 N 0.706