cassava24783.valid.m1 (Manihot esculenta)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08536 (Whirly) IPR013742 cassava24783.valid.m1 T350597_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava24783.valid.m1 Whirly 54 189

Links

Other Whirly family TFs
Other Manihot esculenta TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATWHY2 Arabidopsis lyrata scaffold_202038.1 N 0.735
WHY2 Arabidopsis thaliana AT1G71260 N 0.728
Bostr.10273s0220 Boechera stricta Bostr.10273s0220 N 0.735
PK20247.1 Cannabis sativa PK20247.1 N 0.706
Cagra.0147s0016 Capsella grandiflora Cagra.0147s0016 N 0.721
Carubv10020880m.g Capsella rubella Carubv10020880m.g N 0.728
orange1.1g026312m.g Citrus sinensis orange1.1g026312m.g N 0.716
Eucgr.K01091 Eucalyptus grandis Eucgr.K01091 N 0.801
Thhalv10019058m.g Eutrema salsugineum Thhalv10019058m.g N 0.721
GLYMA19G43880 Glycine max GLYMA19G43880 N 0.731
MLOC_19666 Hordeum vulgare MLOC_19666 N 0.750
Lus10035067.g Linum usitatissimum Lus10035067.g N 0.765
Lus10017892.g Linum usitatissimum Lus10017892.g N 0.765
chr1.LjT14G19.90.nc Lotus japonicus chr1.LjT14G19.90.nc N 0.735
MDP0000168614 Malus domestica MDP0000168614 N 0.750
cassava9653.m1 Manihot esculenta cassava9653.m1 N 0.743
MTR_7g116270 Medicago truncatula MTR_7g116270 N 0.716
mgf015710m Mimulus guttatus mgf015710m N 0.779
ATWHY2 Populus trichocarpa POPTR_0003s04700 N 0.795
Pm022821 Prunus mume Pm022821 N 0.757
PRUPE_ppa011529mg Prunus persica PRUPE_ppa011529mg N 0.757
SapurV1A.0002s0060 Salix purpurea SapurV1A.0002s0060 N 0.794
Solyc11g044750.1 Solanum lycopersicum Solyc11g044750.1 N 0.772
PGSC0003DMG400022930 Solanum tuberosum PGSC0003DMG400022930 N 0.750
TCM_035992 Theobroma cacao TCM_035992 N 0.713