chr1.LjT14G19.90.nc (Lotus japonicus)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08536 (Whirly) IPR013742 chr1.LjT14G19.90.nc T350656_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.LjT14G19.90.nc Whirly 12 147

Links

Other Whirly family TFs
Other Lotus japonicus TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATWHY2 Arabidopsis lyrata scaffold_202038.1 N 0.735
WHY2 Arabidopsis thaliana AT1G71260 N 0.728
Bostr.10273s0220 Boechera stricta Bostr.10273s0220 N 0.721
PK20247.1 Cannabis sativa PK20247.1 N 0.728
Cagra.0147s0016 Capsella grandiflora Cagra.0147s0016 N 0.721
Carubv10020880m.g Capsella rubella Carubv10020880m.g N 0.728
orange1.1g026312m.g Citrus sinensis orange1.1g026312m.g N 0.709
Eucgr.K01091 Eucalyptus grandis Eucgr.K01091 N 0.772
Thhalv10019058m.g Eutrema salsugineum Thhalv10019058m.g N 0.721
GLYMA03G41270 Glycine max GLYMA03G41270 N 0.831
GLYMA19G43880 Glycine max GLYMA19G43880 N 0.824
MLOC_19666 Hordeum vulgare MLOC_19666 N 0.700
Lus10017892.g Linum usitatissimum Lus10017892.g N 0.713
Lus10035067.g Linum usitatissimum Lus10035067.g N 0.728
MDP0000168614 Malus domestica MDP0000168614 N 0.816
cassava24783.valid.m1 Manihot esculenta cassava24783.valid.m1 N 0.735
MTR_7g116270 Medicago truncatula MTR_7g116270 N 0.873
mgf015710m Mimulus guttatus mgf015710m N 0.772
ATWHY2 Populus trichocarpa POPTR_0003s04700 N 0.768
Pm022821 Prunus mume Pm022821 N 0.801
PRUPE_ppa011529mg Prunus persica PRUPE_ppa011529mg N 0.801
SapurV1A.0002s0060 Salix purpurea SapurV1A.0002s0060 N 0.757
Solyc11g044750.1 Solanum lycopersicum Solyc11g044750.1 N 0.735
PGSC0003DMG400022930 Solanum tuberosum PGSC0003DMG400022930 N 0.713