CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pm.C_100033
(
Phytophthora capsici
)
Whirly
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF08536 (Whirly)
IPR013742
estExt_fgenesh1_pm.C_100033
T350657_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pm.C_100033
Whirly
36
167
LYGSDSAFQVAPTAPQYTNGGSYLKTKRVGAIMLSWAKATNSGYNYQNKTFFSLSPSEVGLVLELLDSRIPELSLSHSPNMNASEEDKNTKSLQITRTTGSDGNPLILIKVNHEGESVATLNVGEARVFKEL
Links
Other
Whirly
family TFs
Other
Phytophthora capsici
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g10193
Acanthocheilonema viteae
nAv.1.0.1.g10193
N
Bm7937
Brugia malayi
Bm7937
N
BTMF_0000207501
Brugia timori
BTMF_0000207501
N
nDi.2.2.2.g08208
Dirofilaria immitis
nDi.2.2.2.g08208
N
EEL_0000995201
Elaeophora elaphi
EEL_0000995201
N
nLs.2.1.2.g09793
Litomosoides sigmodontis
nLs.2.1.2.g09793
N
LOAG_08953
Loa loa
LOAG_08953
N
nOo.2.0.1.g09010
Onchocerca ochengi
nOo.2.0.1.g09010
N
WBGene00245836
Onchocerca volvulus
WBGene00245836
N
WBGene00249464
Onchocerca volvulus
WBGene00249464
N