CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pm.C_100033
(
Phytophthora capsici
)
Whirly
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF08536 (Whirly)
IPR013742
estExt_fgenesh1_pm.C_100033
T350657_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pm.C_100033
Whirly
36
167
LYGSDSAFQVAPTAPQYTNGGSYLKTKRVGAIMLSWAKATNSGYNYQNKTFFSLSPSEVGLVLELLDSRIPELSLSHSPNMNASEEDKNTKSLQITRTTGSDGNPLILIKVNHEGESVATLNVGEARVFKEL
Links
Other
Whirly
family TFs
Other
Phytophthora capsici
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_17151
Phytophthora parasitica
F443_17151
N
0.938
PITG_13252
Phytophthora infestans
PITG_13252
N
0.915
Physo137014
Phytophthora sojae
Physo137014
N
0.877
fgenesh_scip_prom.46568.8507
Phytophthora kernoviae
fgenesh_scip_prom.46568.8507
N
0.831
fgenesh_scip_prom.28083.8451
Phytophthora lateralis
fgenesh_scip_prom.28083.8451
N
0.823
Phyra83880
Phytophthora ramorum
Phyra83880
N
0.823
HpaG804518
Hyaloperonospora arabidopsidis
HpaG804518
N
0.700