CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh_scip_prom.28083.8451
(
Phytophthora lateralis
)
Whirly
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08536 (Whirly)
IPR013742
fgenesh_scip_prom.28083.8451
T350499_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh_scip_prom.28083.8451
Whirly
36
167
IYGSDSAFQVAPSAPQYTSAGSYLKTKRVGAIMLSWAKATNNGYNYQSKTFFSLSPSEVGLVLELLDHRIPELSFTHSPNMNASDEDKNSKTLDITRAAGTDGNPLVLIKVNHEAESVATLNVGEARVFREL
Links
Other
Whirly
family TFs
Other
Phytophthora lateralis
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Phyra83880
Phytophthora ramorum
Phyra83880
N
0.969
Physo137014
Phytophthora sojae
Physo137014
N
0.877
F443_17151
Phytophthora parasitica
F443_17151
N
0.823
PITG_13252
Phytophthora infestans
PITG_13252
N
0.823
estExt_fgenesh1_pm.C_100033
Phytophthora capsici
estExt_fgenesh1_pm.C_100033
N
0.823
fgenesh_scip_prom.46568.8507
Phytophthora kernoviae
fgenesh_scip_prom.46568.8507
N
0.792