CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
BRADI1G46427
(
Brachypodium distachyon
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08879 (WRC)
IPR014977
BRADI1G46427
T350774_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AtGRF6
M02545_2.00
Arabidopsis thaliana
NNNNYDNN
NNHRNNNN
PBM
Weirauch et al.(2014)
pTH7356
0.744
0.744
AtGRF6
M07369_2.00
Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN
Dap-seq
OMalley et al.(2016)
AtGRF6_col_a
0.744
0.744
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI1G46427.1
WRC
92
134
PEPGRCRRTDGKKWRCSREAFGESKYCDRHMHRGKNRSRKPVE
Links
Other
WRC
family TFs
Other
Brachypodium distachyon
TFs
552 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava28657.m1
Manihot esculenta
cassava28657.m1
I
0.000
SapurV1A.0532s0070
Salix purpurea
SapurV1A.0532s0070
N
0.744
Solyc01g091540.1
Solanum lycopersicum
Solyc01g091540.1
N
0.000
TCM_005483
Theobroma cacao
TCM_005483
I
0.000
AtGRF9
Vitis vinifera
VIT_15s0048g01740
I
0.000