cassava36463.valid.m1 (Manihot esculenta)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08879 (WRC) IPR014977 cassava36463.valid.m1 T351449_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G42040
M01088_2.00 		Arabidopsis thaliana
NBTRCACYNN
NNRGTGYAVN		 PBM
Sullivan et al.(2014)
pTH7503 		0.860 0.860
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava36463.valid.m1 WRC 209 251

Links

Other WRC family TFs
Other Manihot esculenta TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_02773 Aegilops tauschii F775_02773 I 0.000
MYB107 Arabidopsis lyrata fgenesh2_kg.3__241__AT3G02940.1 I 0.000
AtMYB17 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5002102 I 0.000
AtMYB17 Arabidopsis thaliana AT3G61250 D 0.000
AtMYB9 Arabidopsis thaliana AT5G16770 I 0.000
MYB107 Arabidopsis thaliana AT3G02940 D 0.000
Bostr.2618s0017 Boechera stricta Bostr.2618s0017 I 0.000
Bostr.19046s0006 Boechera stricta Bostr.19046s0006 I 0.000
Bostr.13158s0117 Boechera stricta Bostr.13158s0117 I 0.000
Bo1g155040 Brassica oleracea Bo1g155040 I 0.000
Bo3g012180 Brassica oleracea Bo3g012180 I 0.000
Bo5g150350 Brassica oleracea Bo5g150350 I 0.000
Bra032028 Brassica rapa Bra032028 I 0.000
Bra021382 Brassica rapa Bra021382 I 0.000
Bra008596 Brassica rapa Bra008596 I 0.000
Bra006370 Brassica rapa Bra006370 I 0.000
PK05754.1 Cannabis sativa PK05754.1 I 0.000
Cagra.0434s0044 Capsella grandiflora Cagra.0434s0044 I 0.000
Cagra.1194s0007 Capsella grandiflora Cagra.1194s0007 I 0.000
Cagra.3373s0030 Capsella grandiflora Cagra.3373s0030 I 0.000
Carubv10002573m.g Capsella rubella Carubv10002573m.g I 0.000
Carubv10016434m.g Capsella rubella Carubv10016434m.g I 0.000
Carubv10018382m.g Capsella rubella Carubv10018382m.g I 0.000
evm.TU.supercontig_90.68 Carica papaya evm.TU.supercontig_90.68 I 0.000
Ca_06226 Cicer arietinum Ca_06226 I 0.000
Ca_13779 Cicer arietinum Ca_13779 I 0.000
Ca_11832 Cicer arietinum Ca_11832 I 0.000
Cla021563 Citrullus lanatus Cla021563 I 0.000
Cla013211 Citrullus lanatus Cla013211 I 0.000
Cucsa.318610 Cucumis sativus Cucsa.318610 I 0.000
Cucsa.258270 Cucumis sativus Cucsa.258270 I 0.000
Thhalv10014050m.g Eutrema salsugineum Thhalv10014050m.g I 0.000
Thhalv10022405m.g Eutrema salsugineum Thhalv10022405m.g I 0.000
gene19065-v1.0-hybrid Fragaria vesca gene19065-v1.0-hybrid I 0.000
GLYMA18G46480 Glycine max GLYMA18G46480 I 0.000
GLYMA12G01960 Glycine max GLYMA12G01960 I 0.000
GLYMA11G01150 Glycine max GLYMA11G01150 I 0.000
GLYMA09G39721 Glycine max GLYMA09G39721 I 0.000
GLYMA07G07960 Glycine max GLYMA07G07960 I 0.000
GLYMA03G01540 Glycine max GLYMA03G01540 I 0.000
GLYMA01G44370 Glycine max GLYMA01G44370 I 0.000
Gorai.003G183700 Gossypium raimondii Gorai.003G183700 I 0.000
chr1.CM0591.530.nd Lotus japonicus chr1.CM0591.530.nd I 0.000
cassava25066.valid.m1 Manihot esculenta cassava25066.valid.m1 I 0.000
MTR_4g478180 Medicago truncatula MTR_4g478180 I 0.000
MTR_5g007370 Medicago truncatula MTR_5g007370 I 0.000
MTR_7g076740 Medicago truncatula MTR_7g076740 I 0.000
MTR_8g031360 Medicago truncatula MTR_8g031360 I 0.000
OBART04G23600 Oryza barthii OBART04G23600 I 0.000
OBART06G00820 Oryza barthii OBART06G00820 I 0.000
OB04G30520 Oryza brachyantha OB04G30520 I 0.000
ORGLA04G0201500 Oryza glaberrima ORGLA04G0201500 I 0.000
OGLUM04G23540 Oryza glumaepatula OGLUM04G23540 I 0.000
OGLUM06G00580 Oryza glumaepatula OGLUM06G00580 I 0.000
BGIOSGA014443 Oryza indica BGIOSGA014443 I 0.000
BGIOSGA022168 Oryza indica BGIOSGA022168 I 0.000
BGIOSGA022169 Oryza indica BGIOSGA022169 I 0.000
BGIOSGA022174 Oryza indica BGIOSGA022174 I 0.000
OMERI06G00710 Oryza meridionalis OMERI06G00710 I 0.000
ONIVA04G19830 Oryza nivara ONIVA04G19830 I 0.000
ONIVA06G00830 Oryza nivara ONIVA06G00830 I 0.000
OPUNC06G00590 Oryza punctata OPUNC06G00590 I 0.000
OPUNC04G21140 Oryza punctata OPUNC04G21140 I 0.000
ORUFI06G00810 Oryza rufipogon ORUFI06G00810 I 0.000
ORUFI04G25320 Oryza rufipogon ORUFI04G25320 I 0.000
OS06G0112700 Oryza sativa OS06G0112700 I 0.000
OS04G0593200 Oryza sativa OS04G0593200 I 0.000
Pavir.Gb00812 Panicum virgatum Pavir.Gb00812 I 0.000
Pavir.Ga00758 Panicum virgatum Pavir.Ga00758 I 0.000
Pavir.Da02398 Panicum virgatum Pavir.Da02398 I 0.000
Pm018056 Prunus mume Pm018056 I 0.000
PRUPE_ppa007268mg Prunus persica PRUPE_ppa007268mg I 0.000
Si012660m.g Setaria italica Si012660m.g N 0.000
Traes_2AL_B01AE830F Triticum aestivum Traes_2AL_B01AE830F I 0.000
Traes_2AL_1D7D3D0DE Triticum aestivum Traes_2AL_1D7D3D0DE N 0.000
Traes_2AL_5EE86C5BC Triticum aestivum Traes_2AL_5EE86C5BC I 0.000
Traes_2DL_6BD0572DF Triticum aestivum Traes_2DL_6BD0572DF I 0.000
Traes_2AL_E5B3B79F7 Triticum aestivum Traes_2AL_E5B3B79F7 I 0.000
Traes_2AL_FBC0ED0EE Triticum aestivum Traes_2AL_FBC0ED0EE N 0.000
Traes_2BL_560CCE975 Triticum aestivum Traes_2BL_560CCE975 I 0.000
Traes_2BL_88BBF0441 Triticum aestivum Traes_2BL_88BBF0441 N 0.000
Traes_2BL_C843D1851 Triticum aestivum Traes_2BL_C843D1851 N 0.000
Traes_2DL_25FD0FFB4 Triticum aestivum Traes_2DL_25FD0FFB4 I 0.000
Traes_2DL_54D11D5E7 Triticum aestivum Traes_2DL_54D11D5E7 I 0.000
TRIUR3_26633 Triticum urartu TRIUR3_26633 I 0.000
GRMZM2G081557 Zea mays GRMZM2G081557 N 0.000