cassava41173.m1 (Manihot esculenta)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08879 (WRC) IPR014977 cassava41173.m1 T351459_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtGRF6
M02545_2.00 		Arabidopsis thaliana
NNNNYDNN
NNHRNNNN		 PBM
Weirauch et al.(2014)
pTH7356 		0.767 0.767
AtGRF6
M07369_2.00 		Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN		 Dap-seq
OMalley et al.(2016)
AtGRF6_col_a 		0.767 0.767
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava41173.m1 WRC 117 159

Links

Other WRC family TFs
Other Manihot esculenta TFs

567 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG017936.1 Alligator sinensis Alligator_sinensis_CCG017936.1 I 0.000
ENSACAG00000016965 Anolis carolinensis ENSACAG00000016965 I 0.000
ENSAMXG00000005448 Astyanax mexicanus ENSAMXG00000005448 I 0.000
ZNF653 Bos taurus ENSBTAG00000014415 I 0.000
ZNF653 Callithrix jacchus ENSCJAG00000005551 I 0.000
ZNF653 Canis familiaris ENSCAFG00000031712 I 0.000
ZNF653 Cavia porcellus ENSCPOG00000010842 I 0.000
Cmyd_10005916 Chelonia mydas Cmyd_10005916 I 0.000
ENSCSAG00000006753 Chlorocebus sabaeus ENSCSAG00000006753 I 0.000
znf653 Danio rerio ENSDARG00000093469 I 0.000
ZNF653 Felis catus ENSFCAG00000004922 I 0.000
ZNF653 Homo sapiens ENSG00000161914 D 0.000
ENSSTOG00000003640 Ictidomys tridecemlineatus ENSSTOG00000003640 I 0.000
ENSMMUP00000027145 Macaca fascicularis ENSMMUP00000027145 I 0.000
ZNF653 Macaca mulatta ENSMMUG00000020617 I 0.000
ENSMPUG00000005002 Mustela putorius furo ENSMPUG00000005002 I 0.000
Zfp653 Mus musculus ENSMUSG00000038895 I 0.000
Myotis_brandtii_Znf653_10003855 Myotis brandtii Myotis_brandtii_Znf653_10003855 I 0.000
ZNF653 Myotis lucifugus ENSMLUG00000016337 I 0.000
ENSNLEG00000012591 Nomascus leucogenys ENSNLEG00000012591 I 0.000
Ogr06398 Ophisaurus gracilis Ogr06398 I 0.000
ENSONIG00000008038 Oreochromis niloticus ENSONIG00000008038 I 0.000
ENSOANG00000012102 Ornithorhynchus anatinus ENSOANG00000012102 I 0.000
znf653 Oryzias latipes ENSORLG00000016563 I 0.000
ZNF653 Otolemur garnettii ENSOGAG00000007074 I 0.000
ZNF653 Pan troglodytes ENSPTRG00000010507 I 0.000
ENSPANG00000016446 Papio anubis ENSPANG00000016446 I 0.000
ENSPFOG00000003530 Poecilia formosa ENSPFOG00000003530 I 0.000
Pvit_14576 Pogona vitticeps Pvit_14576 I 0.000
ENSPPYG00000009584 Pongo abelii ENSPPYG00000009584 I 0.000
ZNF653 Pteropus vampyrus ENSPVAG00000014895 I 0.000
Zfp653 Rattus norvegicus ENSRNOG00000014065 I 0.000
ZNF653 Sus scrofa ENSSSCG00000013616 I 0.000
ZNF653 Tursiops truncatus ENSTTRG00000001794 I 0.000