Bostr.25993s0227 (Boechera stricta)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08879 (WRC) IPR014977 Bostr.25993s0227 T351549_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRF9
M07370_2.00 		Arabidopsis thaliana
NTGTCAGANNHNNVH
DBNNDNNTCTGACAN		 Dap-seq
OMalley et al.(2016)
GRF9_col_a 		0.941 0.941
GRF9
M07371_2.00 		Arabidopsis thaliana
TGTCAGAN
NTCTGACA		 Dap-seq
OMalley et al.(2016)
GRF9_colamp_a 		0.941 0.941
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.25993s0227.1.p WRC 87 129
Bostr.25993s0227.1.p WRC 312 353

Links

Other WRC family TFs
Other Boechera stricta TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgenesh1_pm.C_90143 Phytophthora capsici estExt_fgenesh1_pm.C_90143 N
PITG_17567 Phytophthora infestans PITG_17567 N
Phyra84542 Phytophthora ramorum Phyra84542 N
Physo142771 Phytophthora sojae Physo142771 N
Physo143987 Phytophthora sojae Physo143987 N
maker-pir_contig_1091-fgenesh-gene-0.1 Pythium irregulare maker-pir_contig_1091-fgenesh-gene-0.1 N
maker-pir_contig_1608-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_1608-fgenesh-gene-0.0 N
maker-piw_contig_643-fgenesh-gene-0.4 Pythium iwayamai maker-piw_contig_643-fgenesh-gene-0.4 N
PYU1_G006426 Pythium ultimum PYU1_G006426 N
PYU1_G006431 Pythium ultimum PYU1_G006431 N
maker-pve_contig_640-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_640-fgenesh-gene-0.0 N