Bostr.25993s0227 (Boechera stricta)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08879 (WRC) IPR014977 Bostr.25993s0227 T351549_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRF9
M07370_2.00 		Arabidopsis thaliana
NTGTCAGANNHNNVH
DBNNDNNTCTGACAN		 Dap-seq
OMalley et al.(2016)
GRF9_col_a 		0.941 0.941
GRF9
M07371_2.00 		Arabidopsis thaliana
TGTCAGAN
NTCTGACA		 Dap-seq
OMalley et al.(2016)
GRF9_colamp_a 		0.941 0.941
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.25993s0227.1.p WRC 87 129
Bostr.25993s0227.1.p WRC 312 353

Links

Other WRC family TFs
Other Boechera stricta TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.0698s0014 Capsella grandiflora Cagra.0698s0014 I 0.965
Carubv10023501m.g Capsella rubella Carubv10023501m.g I 0.965
AtGRF9 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4002259 I 0.953
GRF9 Arabidopsis thaliana AT2G45480 D 0.941
Thhalv10001460m.g Eutrema salsugineum Thhalv10001460m.g I 0.941
Bo4g195580 Brassica oleracea Bo4g195580 I 0.860
Bra039334 Brassica rapa Bra039334 I 0.859
PK07653.1 Cannabis sativa PK07653.1 I 0.753
AtGRF9 Vitis vinifera VIT_15s0048g01740 I 0.741
TCM_005483 Theobroma cacao TCM_005483 I 0.729
Ca_19588 Cicer arietinum Ca_19588 I 0.729
cassava28657.m1 Manihot esculenta cassava28657.m1 I 0.718
Cucsa.257800 Cucumis sativus Cucsa.257800 N 0.718
Cla021612 Citrullus lanatus Cla021612 N 0.709
MTR_8g035910 Medicago truncatula MTR_8g035910 N 0.706
POPTR_0014s06750 Populus trichocarpa POPTR_0014s06750 I 0.706
Gorai.007G092400 Gossypium raimondii Gorai.007G092400 N 0.706