POPTR_0014s06750 (Populus trichocarpa)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08879 (WRC) IPR014977 POPTR_0014s06750 T351206_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRF9
M07370_2.00 		Arabidopsis thaliana
NTGTCAGANNHNNVH
DBNNDNNTCTGACAN		 Dap-seq
OMalley et al.(2016)
GRF9_col_a 		0.706 0.706
GRF9
M07371_2.00 		Arabidopsis thaliana
TGTCAGAN
NTCTGACA		 Dap-seq
OMalley et al.(2016)
GRF9_colamp_a 		0.706 0.706
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0014s06750.1 WRC 110 152
POPTR_0014s06750.1 WRC 337 378

Links

Other WRC family TFs
Other Populus trichocarpa TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0532s0070 Salix purpurea SapurV1A.0532s0070 N 0.976
Cla021612 Citrullus lanatus Cla021612 N 0.814
AtGRF9 Vitis vinifera VIT_15s0048g01740 I 0.812
Cucsa.257800 Cucumis sativus Cucsa.257800 N 0.802
PK07653.1 Cannabis sativa PK07653.1 I 0.800
cassava36905.valid.m1 Manihot esculenta cassava36905.valid.m1 N 0.791
30174.m008910 Ricinus communis 30174.m008910 N 0.788
TCM_005483 Theobroma cacao TCM_005483 I 0.788
cassava28657.m1 Manihot esculenta cassava28657.m1 I 0.788
MDP0000204597 Malus domestica MDP0000204597 N 0.756
Gorai.007G092400 Gossypium raimondii Gorai.007G092400 N 0.741
Pm017948 Prunus mume Pm017948 N 0.741
PRUPE_ppa021277mg Prunus persica PRUPE_ppa021277mg N 0.741
Bra039334 Brassica rapa Bra039334 I 0.729
gene19384-v1.0-hybrid Fragaria vesca gene19384-v1.0-hybrid N 0.721
Bo4g195580 Brassica oleracea Bo4g195580 I 0.721
Carubv10023501m.g Capsella rubella Carubv10023501m.g I 0.718
Cagra.0698s0014 Capsella grandiflora Cagra.0698s0014 I 0.718
MTR_8g035910 Medicago truncatula MTR_8g035910 N 0.718
Thhalv10001460m.g Eutrema salsugineum Thhalv10001460m.g I 0.706
Ca_19588 Cicer arietinum Ca_19588 I 0.706
GLYMA01G34650 Glycine max GLYMA01G34650 N 0.706
GLYMA03G02500 Glycine max GLYMA03G02500 N 0.706
Bostr.25993s0227 Boechera stricta Bostr.25993s0227 I 0.706
GRF9 Arabidopsis thaliana AT2G45480 D 0.706
Solyc01g091540.1 Solanum lycopersicum Solyc01g091540.1 N 0.702