CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc03g007640.1
(
Solanum lycopersicum
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
Solyc03g007640.1
T354760_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZAP1
M00982_2.00
Arabidopsis thaliana
NRGTCAAN
NTTGACYN
PBM
Lindemose et al.(2014)
WRKY1
0.829
0.448
WRKY27
M02566_2.00
Arabidopsis thaliana
NNGTCHDNN
NNHDGACNN
PBM
Weirauch et al.(2014)
pTH8188
0.826
0.534
WRKY27
M07430_2.00
Arabidopsis thaliana
MAAAGTCAACKNH
DNMGTTGACTTTK
Dap-seq
OMalley et al.(2016)
WRKY27_col_a
0.826
0.534
WRKY27
M07431_2.00
Arabidopsis thaliana
HAAAGTCAACKNH
DNMGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY27_colamp_a
0.826
0.534
WRKY14
M00731_2.00
Arabidopsis thaliana
NRGTCAAMNN
NNKTTGACYN
PBM
Chang et al.(2013)
pTH7570
0.823
0.517
WRKY14
M07375_2.00
Arabidopsis thaliana
NAAAGTCAACGNN
NNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY14_col_a
0.823
0.517
WRKY14
M07376_2.00
Arabidopsis thaliana
NAAAGTCAACGNH
DNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY14_colamp_a
0.823
0.517
WRKY29
M02558_2.00
Arabidopsis thaliana
NNNGTCHDNN
NNHDGACNNN
PBM
Weirauch et al.(2014)
pTH9604
0.822
0.534
WRKY29
M07410_2.00
Arabidopsis thaliana
HAAAGTCAACK
MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY29_col_a
0.822
0.534
WRKY29
M07411_2.00
Arabidopsis thaliana
HWWAGTCAAMDNN
NNHKTTGACTWWD
Dap-seq
OMalley et al.(2016)
WRKY29_colamp_a
0.822
0.534
WRKY65
M07372_2.00
Arabidopsis thaliana
NWWAGTCAACG
CGTTGACTWWN
Dap-seq
OMalley et al.(2016)
WRKY65_col_a
0.820
0.500
WRKY65
M07373_2.00
Arabidopsis thaliana
NAAAGTCAACGN
NCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY65_colamp_a
0.820
0.500
WRKY22
M02557_2.00
Arabidopsis thaliana
NNNKTMHDNN
NNHDKAMNNN
PBM
Weirauch et al.(2014)
pTH7320
0.818
0.534
WRKY22
M07400_2.00
Arabidopsis thaliana
AAAAGTCAACKNH
DNMGTTGACTTTT
Dap-seq
OMalley et al.(2016)
WRKY22_colamp_a
0.818
0.534
WRKY22
M07401_2.00
Arabidopsis thaliana
NAAAGTCAACKNH
DNMGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY22_col
0.818
0.534
WRKY57
M02547_2.00
Arabidopsis thaliana
NNRGTCAAHN
NDTTGACYNN
PBM
Weirauch et al.(2014)
pTH7917
0.809
0.397
WRKY23
M02556_2.00
Arabidopsis thaliana
RGTCAACG
CGTTGACY
PBM
Weirauch et al.(2014)
pTH7387
0.808
0.379
WRKY23
M01089_2.00
Arabidopsis thaliana
NRGTCAAM
KTTGACYN
PBM
Sullivan et al.(2014)
pTH7671
0.808
0.379
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc03g007640.1.1
WRKY
198
255
DDKWAWQKYGQKSIKGSPFPRNYFKCSASNCKATKIIEKSPKNEKYFLVSYSDVHNHD
Links
Other
WRKY
family TFs
Other
Solanum lycopersicum
TFs
798 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMAG_06979
Allomyces macrogynus
AMAG_06979
I
AB07238.1
Alternaria brassicicola
AB07238.1
I
fgenesh1_pm.00609_#_235
Aspergillus carbonarius
fgenesh1_pm.00609_#_235
I
ACLA_049990
Aspergillus clavatus
CADACLAG00004890
I
CADAFLAG00002060
Aspergillus flavus
CADAFLAG00002060
I
AFUA_3G06170
Aspergillus fumigatus
CADAFUAG00005478
I
AFUA_4G10820
Aspergillus fumigatus
CADAFUAG00008327
I
MAT2
Aspergillus nidulans
CADANIAG00005695
I
ANIA_01962
Aspergillus nidulans
CADANIAG00008622
I
CADANGAG00004297
Aspergillus niger
CADANGAG00004297
I
EURHEDRAFT_373724
Aspergillus ruber
EURHEDRAFT_373724
I
EURHEDRAFT_401871
Aspergillus ruber
EURHEDRAFT_401871
I
ATEG_03987
Aspergillus terreus
CADATEAG00009198
I
M437DRAFT_74676
Aureobasidium melanogenum
M437DRAFT_74676
I
M438DRAFT_346080
Aureobasidium pullulans
M438DRAFT_346080
I
AUEXF2481DRAFT_37338
Aureobasidium subglaciale
AUEXF2481DRAFT_37338
I
BATDEDRAFT_7482
Batrachochytrium dendrobatidis
BATDEDRAFT_7482
I
BAUCODRAFT_72427
Baudoinia compniacensis
BAUCODRAFT_72427
I
BBA_05443
Beauveria bassiana
BBA_05443
I
COCC4DRAFT_168040
Bipolaris maydis
COCC4DRAFT_168040
I
COCMIDRAFT_87821
Bipolaris oryzae
COCMIDRAFT_87821
I
COCSADRAFT_171253
Bipolaris sorokiniana
COCSADRAFT_171253
I
COCVIDRAFT_34603
Bipolaris victoriae
COCVIDRAFT_34603
I
COCCADRAFT_38231
Bipolaris zeicola
COCCADRAFT_38231
I
BGIBMGA003078
Bombyx mori
BGIBMGA003078
I
Bcin09g02870
Botrytis cinerea
Bcin09g02870
I
PVAR5_3110
Byssochlamys spectabilis
PVAR5_3110
I
CBG07189
Caenorhabditis briggsae
CBG07189
I
CAGL0D05434g
Candida glabrata
CAGL0D05434g
I
A1O1_00170
Capronia coronata
A1O1_00170
I
A1O1_07971
Capronia coronata
A1O1_07971
I
A1O3_02036
Capronia epimyces
A1O3_02036
I
A1O3_06089
Capronia epimyces
A1O3_06089
I
PV04_01817
Capronia semiimmersa
PV04_01817
I
CHGG_06584
Chaetomium globosum
CHGG_06584
N
CHGG_08188
Chaetomium globosum
CHGG_08188
I
CTHT_0006830
Chaetomium thermophilum
CTHT_0006830
I
Z519_03381
Cladophialophora bantiana
Z519_03381
I
G647_00298
Cladophialophora carrionii
G647_00298
I
G647_10298
Cladophialophora carrionii
G647_10298
I
PV07_10630
Cladophialophora immunda
PV07_10630
I
A1O5_04108
Cladophialophora psammophila
A1O5_04108
I
A1O7_00275
Cladophialophora yegresii
A1O7_00275
I
A1O7_09629
Cladophialophora yegresii
A1O7_09629
I
CPUR_06949
Claviceps purpurea
CPUR_06949
I
CIMG_00406
Coccidioides immitis
CIMG_00406
I
CPC735_058040
Coccidioides posadasii
CPC735_058040
I
CFIO01_09392
Colletotrichum fioriniae
CFIO01_09392
I
CGGC5_2884
Colletotrichum gloeosporioides
CGGC5_2884
I
GLRG_08663
Colletotrichum graminicola
GLRG_08663
I
CH063_08155
Colletotrichum higginsianum
CH063_08155
I
Cob_03892
Colletotrichum orbiculare
Cob_03892
I
CCM_04586
Cordyceps militaris
CCM_04586
I
estExt_fgenesh1_pg.C_20723
Cryphonectria parasitica
estExt_fgenesh1_pg.C_20723
I
H072_9576
Dactylellina haptotyla
H072_9576
I
KGM_19695
Danaus plexippus
KGM_19695
I
YQE_11555
Dendroctonus ponderosae
YQE_11555
I
DOTSEDRAFT_67720
Dothistroma septosporum
DOTSEDRAFT_67720
I
ECANG7_10853
Echinococcus canadensis
ECANG7_10853
I
EPUS_03386
Endocarpon pusillum
EPUS_03386
I
UCREL1_2263
Eutypa lata
UCREL1_2263
I
A1O9_08621
Exophiala aquamarina
A1O9_08621
I
HMPREF1120_05727
Exophiala dermatitidis
HMPREF1120_05727
I
HMPREF1120_08862
Exophiala dermatitidis
HMPREF1120_08862
I
PV10_01892
Exophiala mesophila
PV10_01892
I
PV06_03562
Exophiala oligosperma
PV06_03562
I
PV11_08420
Exophiala sideris
PV11_08420
I
PV08_05977
Exophiala spinifera
PV08_05977
I
PV05_11046
Exophiala xenobiotica
PV05_11046
I
Z517_08752
Fonsecaea pedrosoi
Z517_08752
I
FFUJ_13386
Fusarium fujikuroi
FFUJ_13386
I
FGRRES_05151
Fusarium graminearum
FGRRES_05151
I
FOXG_07900
Fusarium oxysporum
FOXG_07900
I
FPSE_06551
Fusarium pseudograminearum
FPSE_06551
I
NechaG106035
Fusarium solani
NechaG106035
I
FVEG_04822
Fusarium verticillioides
FVEG_04822
I
GGTG_04596
Gaeumannomyces graminis
GGTG_04596
I
GALMADRAFT_224334
Galerina marginata
GALMADRAFT_224334
I
GLOTRDRAFT_98119
Gloeophyllum trabeum
GLOTRDRAFT_98119
I
HMEL002857
Heliconius melpomene
HMEL002857
I
TTAC_0000238201
Hydatigera taeniaeformis
TTAC_0000238201
I
XP_002163303.1
Hydra magnipapillata
XP_002163303.1
I
HDID_0000236901
Hymenolepis diminuta
HDID_0000236901
I
HmN_000874900
Hymenolepis microstoma
HmN_000874900
I
HNAJ_0001105001
Hymenolepis nana
HNAJ_0001105001
I
LEMA_P042400.1
Leptosphaeria maculans
LEMA_P042400.1
I
LLOJ001028
Lutzomyia longipalpis
LLOJ001028
I
MGG_03959
Magnaporthe oryzae
MGG_03959
I
MBM_09015
Marssonina brunnea
MBM_09015
I
MAC_07229
Metarhizium acridum
MAC_07229
I
MANI_017634
Metarhizium anisopliae
MANI_017634
I
MBR_05099
Metarhizium brunneum
MBR_05099
I
MGU_01572
Metarhizium guizhouense
MGU_01572
I
MAJ_07256
Metarhizium majus
MAJ_07256
I
X797_008883
Metarhizium robertsii
X797_008883
I
E5Q_05542
Mixia osmundae
E5Q_05542
I
Moror_9770
Moniliophthora roreri
Moror_9770
I
MYCTH_2115740
Myceliophthora thermophila
MYCTH_2115740
N
estExt_fgenesh1_pg.C_10913
Mycosphaerella fijiensis
estExt_fgenesh1_pg.C_10913
I
NV14822
Nasonia vitripennis
NV14822
I
NCAS_0E02010
Naumovozyma castellii
NCAS_0E02010
I
fgeneshN1_pm.sca_3_chr4_2_0000013
Nectria haematococca
fgeneshN1_pm.sca_3_chr4_2_0000013
I
NFIA_024390
Neosartorya fischeri
CADNFIAG00002255
I
NFIA_105270
Neosartorya fischeri
CADNFIAG00010303
I
NCU03481
Neurospora crassa
NCU03481
I
NEUTE1DRAFT_123419
Neurospora tetrasperma
NEUTE1DRAFT_123419
I
OIDMADRAFT_143853
Oidiodendron maius
OIDMADRAFT_143853
I
OCS_05413
Ophiocordyceps sinensis
OCS_05413
I
OCS_06292
Ophiocordyceps sinensis
OCS_06292
I
PABG_05778
Paracoccidioides brasiliensis
PABG_05778
I
Pc22g06930
Penicillium chrysogenum
Pc22g06930
I
PITC_063570
Penicillium italicum
PITC_063570
I
PITC_068990
Penicillium italicum
PITC_068990
I
PMAA_003200
Penicillium marneffei
PMAA_003200
I
PMAA_040750
Penicillium marneffei
PMAA_040750
I
PDE_01613
Penicillium oxalicum
PDE_01613
I
PDE_06698
Penicillium oxalicum
PDE_06698
I
PCH_Pc22g06930
Penicillium rubens
PCH_Pc22g06930
I
U727_00429890111
Penicillium solitum
U727_00429890111
I
U727_00431010161
Penicillium solitum
U727_00431010161
I
PFICI_11445
Pestalotiopsis fici
PFICI_11445
I
gw1.41.85.1
Phycomyces blakesleeanus
gw1.41.85.1
I
PILCRDRAFT_533337
Piloderma croceum
PILCRDRAFT_533337
I
PredSwiss_ASS2010_4380.1
Pneumocystis carinii
PredSwiss_ASS2010_4380.1
I
PredSwiss_CON587.2
Pneumocystis carinii
PredSwiss_CON587.2
I
PredSwiss_CON647.2
Pneumocystis carinii
PredSwiss_CON647.2
I
PredSwiss_EST753.1
Pneumocystis carinii
PredSwiss_EST753.1
I
PredSwiss_EST856.1
Pneumocystis carinii
PredSwiss_EST856.1
I
PNEG_02134
Pneumocystis murina
PNEG_02134
I
PNEG_02275
Pneumocystis murina
PNEG_02275
I
MYCFIDRAFT_86029
Pseudocercospora fijiensis
MYCFIDRAFT_86029
I
GMDG_03362
Pseudogymnoascus destructans
GMDG_03362
I
V499_06181
Pseudogymnoascus pannorum
V499_06181
I
PaG_02426
Pseudozyma aphidis
PaG_02426
N
PSEUBRA_SCAF20g03099
Pseudozyma brasiliensis
PSEUBRA_SCAF20g03099
N
PHSY_004115
Pseudozyma hubeiensis
PHSY_004115
I
PTT_07342
Pyrenophora teres
PTT_07342
I
PTRG_06171
Pyrenophora triticirepentis
PTRG_06171
I
Z518_08063
Rhinocladiella mackenziei
Z518_08063
I
GLOINDRAFT_204670
Rhizophagus irregularis
GLOINDRAFT_204670
I
GLOINDRAFT_25061
Rhizophagus irregularis
GLOINDRAFT_25061
I
GLOINDRAFT_25196
Rhizophagus irregularis
GLOINDRAFT_25196
I
GLOINDRAFT_336169
Rhizophagus irregularis
GLOINDRAFT_336169
N
GLOINDRAFT_342443
Rhizophagus irregularis
GLOINDRAFT_342443
N
GLOINDRAFT_349054
Rhizophagus irregularis
GLOINDRAFT_349054
N
GLOINDRAFT_44046
Rhizophagus irregularis
GLOINDRAFT_44046
I
GLOINDRAFT_44333
Rhizophagus irregularis
GLOINDRAFT_44333
I
GLOINDRAFT_47134
Rhizophagus irregularis
GLOINDRAFT_47134
N
GLOINDRAFT_49297
Rhizophagus irregularis
GLOINDRAFT_49297
I
GLOINDRAFT_49487
Rhizophagus irregularis
GLOINDRAFT_49487
N
GLOINDRAFT_51431
Rhizophagus irregularis
GLOINDRAFT_51431
I
GLOINDRAFT_52776
Rhizophagus irregularis
GLOINDRAFT_52776
I
GLOINDRAFT_56588
Rhizophagus irregularis
GLOINDRAFT_56588
I
GLOINDRAFT_61497
Rhizophagus irregularis
GLOINDRAFT_61497
I
GLOINDRAFT_75094
Rhizophagus irregularis
GLOINDRAFT_75094
I
GLOINDRAFT_75362
Rhizophagus irregularis
GLOINDRAFT_75362
I
GLOINDRAFT_96919
Rhizophagus irregularis
GLOINDRAFT_96919
N
GLOINDRAFT_97060
Rhizophagus irregularis
GLOINDRAFT_97060
N
Scas_Contig614.4
Saccharomyces castellii
Scas_Contig614.4
I
SAPIO_CDS2868
Scedosporium apiospermum
SAPIO_CDS2868
I
SSLN_0001637801
Schistocephalus solidus
SSLN_0001637801
I
SPOG_03188
Schizosaccharomyces cryophilus
SPOG_03188
I
SJAG_04009
Schizosaccharomyces japonicus
SJAG_04009
I
SJAG_05153
Schizosaccharomyces japonicus
SJAG_05153
I
SOCG_01448
Schizosaccharomyces octosporus
SOCG_01448
I
SOCG_02523
Schizosaccharomyces octosporus
SOCG_02523
I
mat3-Mc
Schizosaccharomyces pombe
SPBC1711.02
I
mat1-Mc
Schizosaccharomyces pombe
SPBC23G7.09
D
ste11
Schizosaccharomyces pombe
SPBC32C12.02
D
mat3-Mc
Schizosaccharomyces pombe
SPMTR.04
I
SBOR_3594
Sclerotinia borealis
SBOR_3594
I
SETTUDRAFT_174840
Setosphaeria turcica
SETTUDRAFT_174840
I
SMAC_07212
Sordaria macrospora
SMAC_07212
I
SEPMUDRAFT_153151
Sphaerulina musiva
SEPMUDRAFT_153151
I
SPER_0001384501
Spirometra erinaceieuropaei
SPER_0001384501
I
SPPG_01923
Spizellomyces punctatus
SPPG_01923
I
SPPG_05561
Spizellomyces punctatus
SPPG_05561
I
SPBR_09078
Sporothrix brasiliensis
SPBR_09078
I
S40288_01674
Stachybotrys chartarum
S40288_01674
I
S40285_03081
Stachybotrys chlorohalonata
S40285_03081
I
SNOG_07773
Stagonospora nodorum
SNOG_07773
I
TASK_0001001001
Taenia asiatica
TASK_0001001001
I
TsM_000188900
Taenia solium
TsM_000188900
I
PMAA_003200
Talaromyces marneffei
PMAA_003200
I
PMAA_040750
Talaromyces marneffei
PMAA_040750
I
TSTA_008530
Talaromyces stipitatus
TSTA_008530
I
TSTA_076640
Talaromyces stipitatus
TSTA_076640
I
TSTA_077960
Talaromyces stipitatus
TSTA_077960
I
VHEMI05549
Torrubiella hemipterigena
VHEMI05549
I
TDEL_0H02760
Torulaspora delbrueckii
TDEL_0H02760
I
BN946_scf184940.g27
Trametes cinnabarina
BN946_scf184940.g27
I
TRIREDRAFT_34248
Trichoderma reesei
TRIREDRAFT_34248
I
TVAG_142450
Trichomonas vaginalis
TVAG_142450
I
TVAG_180150
Trichomonas vaginalis
TVAG_180150
I
TVAG_201900
Trichomonas vaginalis
TVAG_201900
I
TVAG_280760
Trichomonas vaginalis
TVAG_280760
I
TEQG_04869
Trichophyton equinum
TEQG_04869
I
H101_00568
Trichophyton interdigitale
H101_00568
I
UV8b_664
Ustilaginoidea virens
UV8b_664
I
PV09_07372
Verruconis gallopava
PV09_07372
I
VDAG_07007
Verticillium dahliae
VDAG_07007
I
YALI0_B02266g
Yarrowia lipolytica
YALI0_B02266g
I
YALI0_D22660g
Yarrowia lipolytica
YALI0_D22660g
I
L798_04766
Zootermopsis nevadensis
L798_04766
I
ZYRO0D15312g
Zygosaccharomyces rouxii
ZYRO0D15312g
I