CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_840061
(
Physcomitrella patens
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
estExt_fgenesh1_pg.C_840061
T355643_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_840061
WRKY
290
348
DDGHRCWKKYGNKAIQNSTFCRGYYKCSMKECRAKKMVQPTDTNPSIFEVTYLGKHTCS
Links
Other
WRKY
family TFs
Other
Physcomitrella patens
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI2G11890
Brachypodium distachyon
BRADI2G11890
I
BRADI5G25570
Brachypodium distachyon
BRADI5G25570
I
Bra021594
Brassica rapa
Bra021594
I
evm.TU.supercontig_162.25
Carica papaya
evm.TU.supercontig_162.25
I
GLYMA19G43815
Glycine max
GLYMA19G43815
I
Gorai.007G281000
Gossypium raimondii
Gorai.007G281000
I
LPERR03G14670
Leersia perrieri
LPERR03G14670
N
LPERR03G05410
Leersia perrieri
LPERR03G05410
N
Lus10021873.g
Linum usitatissimum
Lus10021873.g
I
MDP0000322279
Malus domestica
MDP0000322279
I
cassava22677.valid.m1
Manihot esculenta
cassava22677.valid.m1
I
cassava47179.m1
Manihot esculenta
cassava47179.m1
I
GSMUA_Achr10G19950_001
Musa acuminata
GSMUA_Achr10G19950_001
I
GSMUA_Achr6G27040_001
Musa acuminata
GSMUA_Achr6G27040_001
I
OBART07G26160
Oryza barthii
OBART07G26160
N
OBART03G06100
Oryza barthii
OBART03G06100
I
ORGLA01G0108600
Oryza glaberrima
ORGLA01G0108600
I
ORGLA03G0058800
Oryza glaberrima
ORGLA03G0058800
N
ORGLA03G0058900
Oryza glaberrima
ORGLA03G0058900
I
ORGLA03G0161100
Oryza glaberrima
ORGLA03G0161100
N
ORGLA07G0205000
Oryza glaberrima
ORGLA07G0205000
N
ORGLA10G0072500
Oryza glaberrima
ORGLA10G0072500
I
OGLUM03G06090
Oryza glumaepatula
OGLUM03G06090
N
OGLUM03G06100
Oryza glumaepatula
OGLUM03G06100
I
OGLUM03G17210
Oryza glumaepatula
OGLUM03G17210
N
OGLUM07G26170
Oryza glumaepatula
OGLUM07G26170
N
OGLUM10G08400
Oryza glumaepatula
OGLUM10G08400
I
BGIOSGA023726
Oryza indica
BGIOSGA023726
N
BGIOSGA003364
Oryza indica
BGIOSGA003364
I
BGIOSGA011326
Oryza indica
BGIOSGA011326
I
BGIOSGA012597
Oryza indica
BGIOSGA012597
N
BGIOSGA032849
Oryza indica
BGIOSGA032849
I
OMERI12G11270
Oryza meridionalis
OMERI12G11270
I
OMERI10G05820
Oryza meridionalis
OMERI10G05820
I
OMERI07G22780
Oryza meridionalis
OMERI07G22780
N
OMERI03G15020
Oryza meridionalis
OMERI03G15020
N
OMERI03G05920
Oryza meridionalis
OMERI03G05920
I
ONIVA03G06110
Oryza nivara
ONIVA03G06110
I
ONIVA10G08250
Oryza nivara
ONIVA10G08250
I
ONIVA07G25780
Oryza nivara
ONIVA07G25780
N
ONIVA03G17860
Oryza nivara
ONIVA03G17860
N
ONIVA03G06100
Oryza nivara
ONIVA03G06100
N
OPUNC03G16250
Oryza punctata
OPUNC03G16250
N
OPUNC03G05900
Oryza punctata
OPUNC03G05900
I
OPUNC01G12900
Oryza punctata
OPUNC01G12900
I
OPUNC07G24590
Oryza punctata
OPUNC07G24590
N
ORUFI03G17430
Oryza rufipogon
ORUFI03G17430
N
ORUFI07G27120
Oryza rufipogon
ORUFI07G27120
N
ORUFI10G09060
Oryza rufipogon
ORUFI10G09060
I
OS03G0341000
Oryza sativa
OS03G0341000
N
OS10G0390800
Oryza sativa
OS10G0390800
I
OS07G0674800
Oryza sativa
OS07G0674800
N
OS03G0183300
Oryza sativa
OS03G0183300
I
OS01G0313300
Oryza sativa
OS01G0313300
I
Pavir.Eb02324
Panicum virgatum
Pavir.Eb02324
I
Pavir.Bb03609
Panicum virgatum
Pavir.Bb03609
I
Pavir.Ba00136
Panicum virgatum
Pavir.Ba00136
I
Pavir.J12680
Panicum virgatum
Pavir.J12680
N
Pavir.Ia04158
Panicum virgatum
Pavir.Ia04158
I
Pavir.Ib00527
Panicum virgatum
Pavir.Ib00527
N
Pavir.Ib00528
Panicum virgatum
Pavir.Ib00528
I
Pavir.J08480
Panicum virgatum
Pavir.J08480
I
e_gw1.60.113.1
Physcomitrella patens
e_gw1.60.113.1
I
POPTR_0013s04240
Populus trichocarpa
POPTR_0013s04240
I
SELMODRAFT_17703
Selaginella moellendorffii
SELMODRAFT_17703
I
SELMODRAFT_73134
Selaginella moellendorffii
SELMODRAFT_73134
I
SELMODRAFT_73164
Selaginella moellendorffii
SELMODRAFT_73164
I
SELMODRAFT_73169
Selaginella moellendorffii
SELMODRAFT_73169
I
Si031079m.g
Setaria italica
Si031079m.g
I
Si002845m.g
Setaria italica
Si002845m.g
I
Si036118m.g
Setaria italica
Si036118m.g
I
Sb01g045040
Sorghum bicolor
Sb01g045040
I
Sb01g045050
Sorghum bicolor
Sb01g045050
N
Sb02g042760
Sorghum bicolor
Sb02g042760
I
Sb03g012890
Sorghum bicolor
Sb03g012890
I
TCM_026233
Theobroma cacao
TCM_026233
I
Traes_5DL_41E3B1B23
Triticum aestivum
Traes_5DL_41E3B1B23
I
TRAES3BF171600010CFD_g
Triticum aestivum
TRAES3BF171600010CFD_g
I
Traes_4AS_8A64DBE8E
Triticum aestivum
Traes_4AS_8A64DBE8E
I
Traes_4BL_7EC2BFC7B
Triticum aestivum
Traes_4BL_7EC2BFC7B
I
Traes_5BL_98D063967
Triticum aestivum
Traes_5BL_98D063967
I
TRIUR3_28710
Triticum urartu
TRIUR3_28710
I
GRMZM2G169382
Zea mays
GRMZM2G169382
I
GRMZM2G053503
Zea mays
GRMZM2G053503
I
GRMZM2G025062
Zea mays
GRMZM2G025062
I
AC206951.3_FG017
Zea mays
AC206951.3_FG017
I
AC206951.3_FG016
Zea mays
AC206951.3_FG016
N