CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Aquca_021_00165 *(Aquilegia coerulea)* WRKY
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF03106 (WRKY)	IPR003657	Aquca_021_00165	T355771_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
WRKY65 M07372_2.00	Arabidopsis thaliana	NWWAGTCAACG	CGTTGACTWWN	Dap-seq OMalley et al.(2016) WRKY65_col_a	0.884	0.847
WRKY65 M07373_2.00	Arabidopsis thaliana	NAAAGTCAACGN	NCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY65_colamp_a	0.884	0.847
WRKY14 M00731_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Chang et al.(2013) pTH7570	0.877	0.814
WRKY14 M07375_2.00	Arabidopsis thaliana	NAAAGTCAACGNN	NNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_col_a	0.877	0.814
WRKY14 M07376_2.00	Arabidopsis thaliana	NAAAGTCAACGNH	DNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_colamp_a	0.877	0.814
WRKY27 M02566_2.00	Arabidopsis thaliana	NNGTCHDNN	NNHDGACNN	PBM Weirauch et al.(2014) pTH8188	0.876	0.729
WRKY27 M07430_2.00	Arabidopsis thaliana	MAAAGTCAACKNH	DNMGTTGACTTTK	Dap-seq OMalley et al.(2016) WRKY27_col_a	0.876	0.729
WRKY27 M07431_2.00	Arabidopsis thaliana	HAAAGTCAACKNH	DNMGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY27_colamp_a	0.876	0.729
WRKY22 M02557_2.00	Arabidopsis thaliana	NNNKTMHDNN	NNHDKAMNNN	PBM Weirauch et al.(2014) pTH7320	0.873	0.763
WRKY22 M07400_2.00	Arabidopsis thaliana	AAAAGTCAACKNH	DNMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY22_colamp_a	0.873	0.763
WRKY22 M07401_2.00	Arabidopsis thaliana	NAAAGTCAACKNH	DNMGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY22_col	0.873	0.763
WRKY29 M02558_2.00	Arabidopsis thaliana	NNNGTCHDNN	NNHDGACNNN	PBM Weirauch et al.(2014) pTH9604	0.866	0.729
WRKY29 M07410_2.00	Arabidopsis thaliana	HAAAGTCAACK	MGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY29_col_a	0.866	0.729
WRKY29 M07411_2.00	Arabidopsis thaliana	HWWAGTCAAMDNN	NNHKTTGACTWWD	Dap-seq OMalley et al.(2016) WRKY29_colamp_a	0.866	0.729
Q40828_PETCR M11467_2.00	Petroselinum crispum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY_Q2	0.865	0.695
WRKY15 M02549_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Weirauch et al.(2014) pTH7602	0.865	0.678
WRKY15 M07383_2.00	Arabidopsis thaliana	AAAAGTCAACKN	NMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY15_colamp_a	0.865	0.678
WRKY15 M07384_2.00	Arabidopsis thaliana	NWAAGTCAACB	VGTTGACTTWN	Dap-seq OMalley et al.(2016) WRKY15_col_b	0.865	0.678
WRKY21 M02553_2.00	Arabidopsis thaliana	NNRGTCAAMN	NKTTGACYNN	PBM Weirauch et al.(2014) pTH7422	0.860	0.678
WRKY21 M07389_2.00	Arabidopsis thaliana	HAAAGTCAACNNH	DNNGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY21_colamp_a	0.860	0.678
WRKY21 M07390_2.00	Arabidopsis thaliana	HAAAGTCAACK	MGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY21_col	0.860	0.678
WRKY7 M07412_2.00	Arabidopsis thaliana	NNDDDNNNNMAAAGTCAACGV	BCGTTGACTTTKNNNNHHHNN	Dap-seq OMalley et al.(2016) WRKY7_colamp_a	0.859	0.661
WRKY7 M07413_2.00	Arabidopsis thaliana	NAAAAGTCAACKNN	NNMGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY7_col	0.859	0.661
WRKY11 M02559_2.00	Arabidopsis thaliana	NDGTCAAHNN	NNDTTGACHN	PBM Weirauch et al.(2014) pTH8091	0.856	0.627
WRKY11 M07415_2.00	Arabidopsis thaliana	NHAAAGTCAACBNH	DNVGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY11_col_a	0.856	0.627
WRKY11 M11464_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY11_Q2	0.856	0.627
WRKY17 M02550_2.00	Arabidopsis thaliana	NNDGTCAAHN	NDTTGACHNN	PBM Weirauch et al.(2014) pTH8088	0.854	0.627
WRKY17 M07385_2.00	Arabidopsis thaliana	NHAAAGTCAACRNN	NNYGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY17_col_a	0.854	0.627
WRKY17 M07386_2.00	Arabidopsis thaliana	NMAAAGTCAACGN	NCGTTGACTTTKN	Dap-seq OMalley et al.(2016) WRKY17_colamp_a	0.854	0.627
ZAP1 M00982_2.00	Arabidopsis thaliana	NRGTCAAN	NTTGACYN	PBM Lindemose et al.(2014) WRKY1	0.828	0.576
WRKY8 M02564_2.00	Arabidopsis thaliana	NRGTCAAHN	NDTTGACYN	PBM Weirauch et al.(2014) pTH7554	0.827	0.542
WRKY28 M07406_2.00	Arabidopsis thaliana	HAAAGTCAAMNNH	DNNKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY28_col_a	0.827	0.542
WRKY28 M07407_2.00	Arabidopsis thaliana	VAAAGTCAAMG	CKTTGACTTTB	Dap-seq OMalley et al.(2016) WRKY28_colamp_a	0.827	0.542
WRKY8 M07428_2.00	Arabidopsis thaliana	NAAAAGTCAACRNHW	WDNYGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY8_colamp_a	0.827	0.542
WRKY8 M07429_2.00	Arabidopsis thaliana	NNVAAAGTCAACRNH	DNYGTTGACTTTBNN	Dap-seq OMalley et al.(2016) WRKY8_col	0.827	0.542
WRKY48 M02565_2.00	Arabidopsis thaliana	NNVGTCADNN	NNHTGACBNN	PBM Weirauch et al.(2014) pTH7552	0.826	0.525
WRKY71 M07374_2.00	Arabidopsis thaliana	HAAAGTCAAMN	NKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY71_col_a	0.823	0.525
WRKY57 M02547_2.00	Arabidopsis thaliana	NNRGTCAAHN	NDTTGACYNN	PBM Weirauch et al.(2014) pTH7917	0.820	0.508
WRKY23 M02556_2.00	Arabidopsis thaliana	RGTCAACG	CGTTGACY	PBM Weirauch et al.(2014) pTH7387	0.820	0.508
WRKY23 M01089_2.00	Arabidopsis thaliana	NRGTCAAM	KTTGACYN	PBM Sullivan et al.(2014) pTH7671	0.820	0.508
For this family, TFs with SR scores > 0.808* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Aquca_021_00165.1	WRKY	82	140	YDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTMMVITYACDHNHS

Links
Other WRKY family TFs
Other *Aquilegia coerulea* TFs

1579 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ENSAMEG00000001160	Ailuropoda melanoleuca	ENSAMEG00000001160	I
Alligator_sinensis_CCG020665.1	Alligator sinensis	Alligator_sinensis_CCG020665.1	I
ENSAPLG00000013908	Anas platyrhynchos	ENSAPLG00000013908	I
ENSBTAP00000000107-D1	Bos grunniens	ENSBTAP00000000107-D1	I
SETDB1	Bos taurus	ENSBTAG00000000098	I
SETDB1	Callithrix jacchus	ENSCJAG00000006972	I
SETDB1	Canis familiaris	ENSCAFG00000023501	I
SETDB1	Cavia porcellus	ENSCPOG00000001632	I
Cmyd_10007606	Chelonia mydas	Cmyd_10007606	I
ENSCSAG00000018034	Chlorocebus sabaeus	ENSCSAG00000018034	I
SETDB1	Choloepus hoffmanni	ENSCHOG00000004013	I
setdb1b	Danio rerio	ENSDARG00000099021	I
SETDB1	Dasypus novemcinctus	ENSDNOG00000007754	I
Setdb1	Dipodomys ordii	ENSDORG00000006830	I
SETDB1	Equus caballus	ENSECAG00000023954	I
SETDB1	Erinaceus europaeus	ENSEEUG00000015825	I
SETDB1	Felis catus	ENSFCAG00000009655	I
ENSGMOG00000005993	Gadus morhua	ENSGMOG00000005993	I
ENSGALG00000029138	Gallus gallus	ENSGALG00000029138	I
SETDB1	Gallus gallus	ENSGALG00000024051	I
setdb1b	Gasterosteus aculeatus	ENSGACG00000011675	I
SETDB1	Gorilla gorilla	ENSGGOG00000016308	I
SETDB1	Homo sapiens	ENSG00000143379	D
ENSSTOG00000006770	Ictidomys tridecemlineatus	ENSSTOG00000006770	I
ENSLACG00000011159	Latimeria chalumnae	ENSLACG00000011159	I
SETDB1	Loxodonta africana	ENSLAFG00000004006	I
ENSP00000357965	Macaca fascicularis	ENSP00000357965	I
SETDB1	Macaca mulatta	ENSMMUG00000023235	I
ENSMEUG00000006544	Macropus eugenii	ENSMEUG00000006544	I
ENSMEUG00000000555	Macropus eugenii	ENSMEUG00000000555	I
SETDB1	Meleagris gallopavo	ENSMGAG00000001018	I
SETDB1	Microcebus murinus	ENSMICG00000000425	I
SETDB1	Monodelphis domestica	ENSMODG00000018821	I
ENSMPUG00000004298	Mustela putorius furo	ENSMPUG00000004298	I
Setdb1	Mus musculus	ENSMUSG00000015697	I
Myotis_brandtii_SETDB1_10031834	Myotis brandtii	Myotis_brandtii_SETDB1_10031834	I
SETDB1	Myotis lucifugus	ENSMLUG00000010486	I
ENSNLEG00000009996	Nomascus leucogenys	ENSNLEG00000009996	I
SETDB1	Ochotona princeps	ENSOPRG00000015349	I
ENSONIG00000006454	Oreochromis niloticus	ENSONIG00000006454	I
ENSOANG00000028880	Ornithorhynchus anatinus	ENSOANG00000028880	I
SETDB1	Oryctolagus cuniculus	ENSOCUG00000003642	I
setdb1b	Oryzias latipes	ENSORLG00000010602	I
SETDB1	Otolemur garnettii	ENSOGAG00000010320	I
ENSOARG00000020880	Ovis aries	ENSOARG00000020880	I
SETDB1	Pan troglodytes	ENSPTRG00000001267	I
ENSPSIG00000008407	Pelodiscus sinensis	ENSPSIG00000008407	I
ENSPFOG00000004429	Poecilia formosa	ENSPFOG00000004429	I
ENSPFOG00000004623	Poecilia formosa	ENSPFOG00000004623	I
Pvit_04977	Pogona vitticeps	Pvit_04977	I
ENSPPYG00000000887	Pongo abelii	ENSPPYG00000000887	I
SETDB1	Procavia capensis	ENSPCAG00000002527	I
SETDB1	Pteropus vampyrus	ENSPVAG00000004355	I
Setdb1	Rattus norvegicus	ENSRNOG00000021143	I
ENSSHAG00000012701	Sarcophilus harrisii	ENSSHAG00000012701	I
SETDB1	Sus scrofa	ENSSSCG00000006645	I
SETDB1	Taeniopygia guttata	ENSTGUG00000004684	I
setdb1b	Takifugu rubripes	ENSTRUG00000014641	I
setdb1b	Tetraodon nigroviridis	ENSTNIG00000008065	I
SETDB1	Tupaia belangeri	ENSTBEG00000009306	I
SETDB1	Tursiops truncatus	ENSTTRG00000006966	I
SETDB1	Vicugna pacos	ENSVPAG00000005440	I
setdb1.L	Xenopus laevis	XB-GENE-866480	I
XP_002935515	Xenopus tropicalis	XP_002935515	I
XP_002935516	Xenopus tropicalis	XP_002935516	I
ENSXMAG00000016600	Xiphophorus maculatus	ENSXMAG00000016600	I

Aquca_021_00165 (Aquilegia coerulea) WRKY

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1579 Related TFs

Aquca_021_00165 **(Aquilegia coerulea)
WRKY**