Cagra.0255s0014 (Capsella grandiflora)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Cagra.0255s0014 T355871_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY62
M02561_2.00 		Arabidopsis thaliana
TRGTCAAM
KTTGACYA		 PBM
Weirauch et al.(2014)
pTH8246 		0.880 0.932
WRKY38
M00901_2.00 		Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY38 		0.854 0.695
WRKY63
M02546_2.00 		Arabidopsis thaliana
NGGTCAAN
NTTGACCN		 PBM
Weirauch et al.(2014)
pTH8182 		0.844 0.695
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0255s0014.1.p WRKY 110 170

Links

Other WRKY family TFs
Other Capsella grandiflora TFs

172 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_19744 Aegilops tauschii F775_19744 N
F775_18830 Aegilops tauschii F775_18830 N
F775_10624 Aegilops tauschii F775_10624 N
F775_11347 Aegilops tauschii F775_11347 I
F775_14190 Aegilops tauschii F775_14190 I
AMTR_s00009p00242790 Amborella trichopoda AMTR_s00009p00242790 I
GLYMA03G30940 Glycine max GLYMA03G30940 I
Gorai.001G012400 Gossypium raimondii Gorai.001G012400 I
MLOC_38470 Hordeum vulgare MLOC_38470 N
LPERR04G17390 Leersia perrieri LPERR04G17390 N
LPERR04G17400 Leersia perrieri LPERR04G17400 I
LPERR08G11070 Leersia perrieri LPERR08G11070 N
LPERR04G17380 Leersia perrieri LPERR04G17380 N
cassava8594.m1 Manihot esculenta cassava8594.m1 I
GSMUA_Achr11G21270_001 Musa acuminata GSMUA_Achr11G21270_001 I
GSMUA_Achr3G10120_001 Musa acuminata GSMUA_Achr3G10120_001 I
GSMUA_Achr5G20600_001 Musa acuminata GSMUA_Achr5G20600_001 N
GSMUA_Achr9G18080_001 Musa acuminata GSMUA_Achr9G18080_001 I
OBART01G20350 Oryza barthii OBART01G20350 N
OBART04G21320 Oryza barthii OBART04G21320 N
OBART04G21370 Oryza barthii OBART04G21370 N
OB01G30110 Oryza brachyantha OB01G30110 N
OB02G27530 Oryza brachyantha OB02G27530 N
OB04G28350 Oryza brachyantha OB04G28350 N
OB04G28380 Oryza brachyantha OB04G28380 N
OB04G28390 Oryza brachyantha OB04G28390 N
ORGLA11G0077500 Oryza glaberrima ORGLA11G0077500 N
ORGLA04G0183900 Oryza glaberrima ORGLA04G0183900 N
ORGLA04G0183800 Oryza glaberrima ORGLA04G0183800 N
OGLUM01G23970 Oryza glumaepatula OGLUM01G23970 N
OGLUM04G21260 Oryza glumaepatula OGLUM04G21260 N
OGLUM04G21350 Oryza glumaepatula OGLUM04G21350 N
BGIOSGA015472 Oryza indica BGIOSGA015472 N
BGIOSGA014567 Oryza indica BGIOSGA014567 N
BGIOSGA014565 Oryza indica BGIOSGA014565 N
BGIOSGA003821 Oryza indica BGIOSGA003821 N
BGIOSGA003819 Oryza indica BGIOSGA003819 N
OLONG_009946 Oryza longistaminata OLONG_009946 N
OLONG_016958 Oryza longistaminata OLONG_016958 N
OLONG_016960 Oryza longistaminata OLONG_016960 N
OMERI01G18860 Oryza meridionalis OMERI01G18860 N
OMERI04G17820 Oryza meridionalis OMERI04G17820 N
OMERI04G17790 Oryza meridionalis OMERI04G17790 N
OMERI01G18770 Oryza meridionalis OMERI01G18770 N
ONIVA01G22980 Oryza nivara ONIVA01G22980 N
ONIVA04G19650 Oryza nivara ONIVA04G19650 N
ONIVA04G19860 Oryza nivara ONIVA04G19860 N
ONIVA01G22920 Oryza nivara ONIVA01G22920 N
OPUNC04G19030 Oryza punctata OPUNC04G19030 N
OPUNC04G19040 Oryza punctata OPUNC04G19040 N
ORUFI01G23050 Oryza rufipogon ORUFI01G23050 N
ORUFI11G09150 Oryza rufipogon ORUFI11G09150 N
ORUFI04G22910 Oryza rufipogon ORUFI04G22910 N
ORUFI04G22890 Oryza rufipogon ORUFI04G22890 N
OS04G0557200 Oryza sativa OS04G0557200 N
OS04G0557800 Oryza sativa OS04G0557800 N
Pavir.J34298 Panicum virgatum Pavir.J34298 N
Pavir.Gb01093 Panicum virgatum Pavir.Gb01093 N
Pavir.Cb00833 Panicum virgatum Pavir.Cb00833 N
PDK_20s1464821g001 Phoenix dactylifera PDK_20s1464821g001 I
POPTR_0006s13790 Populus trichocarpa POPTR_0006s13790 I
29739.m003684 Ricinus communis 29739.m003684 I
SapurV1A.0249s0140 Salix purpurea SapurV1A.0249s0140 I
Si000845m.g Setaria italica Si000845m.g I
Si012401m.g Setaria italica Si012401m.g I
PGSC0003DMG402030621 Solanum tuberosum PGSC0003DMG402030621 I
Sb06g025040 Sorghum bicolor Sb06g025040 I
Sb06g025020 Sorghum bicolor Sb06g025020 N
Sb06g025060 Sorghum bicolor Sb06g025060 I
TCM_037645 Theobroma cacao TCM_037645 I
Traes_2DL_099D4CA9B Triticum aestivum Traes_2DL_099D4CA9B N
Traes_2AL_4F71A8FB4 Triticum aestivum Traes_2AL_4F71A8FB4 N
TRIUR3_18279 Triticum urartu TRIUR3_18279 N
TRIUR3_26157 Triticum urartu TRIUR3_26157 N
TRIUR3_35186 Triticum urartu TRIUR3_35186 N
GRMZM5G822829 Zea mays GRMZM5G822829 N
GRMZM2G172795 Zea mays GRMZM2G172795 I