Ciclev10013781m.g (Citrus clementina)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Ciclev10013781m.g T356026_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY3
M07381_2.00 		Arabidopsis thaliana
MAWAGTCAAMR
YKTTGACTWTK		 Dap-seq
OMalley et al.(2016)
WRKY3_col_a 		0.863 0.835
PK05432.1
M01324_2.00 		Cannabis sativa
NNRGTCARH
DYTGACYNN		 PBM
Lambert et al.(2019)
pTH11342 		0.857 0.843
WRKY2
M02567_2.00 		Arabidopsis thaliana
BRGTCAAM
KTTGACYV		 PBM
Weirauch et al.(2014)
pTH8832 		0.851 0.800
WRKY20
M07414_2.00 		Arabidopsis thaliana
HHHRGTCAAMGNH
DNCKTTGACYDDD		 Dap-seq
OMalley et al.(2016)
WRKY20_col_a 		0.849 0.783
Q40090_IPOBA
M11466_2.00 		Ipomoea batatas Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SPF1_Q2 		0.846 0.783
WRKY33
M02554_2.00 		Arabidopsis thaliana
NNRGTCHDNN
NNHDGACYNN		 PBM
Weirauch et al.(2014)
pTH8183 		0.844 0.783
WRKY33
M07391_2.00 		Arabidopsis thaliana
HWWAGTCAAMD
HKTTGACTWWD		 Dap-seq
OMalley et al.(2016)
WRKY33_col_a 		0.844 0.783
ZAP1
M02726_2.00 		Arabidopsis thaliana
DRCKCGGTCAA
TTGACCGMGYH		 SELEX
Mathelier et al.(2014)
MA0589.1 		0.844 0.652
ZAP1
M11463_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ZAP1_01 		0.844 0.652
WRKY26
M07418_2.00 		Arabidopsis thaliana
MWAAGTCAACGNH
DNCGTTGACTWWK		 Dap-seq
OMalley et al.(2016)
WRKY26_col_a 		0.842 0.739
WRKY26
M07419_2.00 		Arabidopsis thaliana
HMWAGTCAAMR
YKTTGACTWKD		 Dap-seq
OMalley et al.(2016)
WRKY26_colamp_a 		0.842 0.739
WRKY25
M02552_2.00 		Arabidopsis thaliana
YRGTCAAM
KTTGACYR		 PBM
Weirauch et al.(2014)
pTH8810 		0.825 0.670
WRKY25
M07387_2.00 		Arabidopsis thaliana
HWWRGTCAAMR
YKTTGACYWWD		 Dap-seq
OMalley et al.(2016)
WRKY25_col_a 		0.825 0.670
WRKY25
M07388_2.00 		Arabidopsis thaliana
NNNHWRGTCAACRNH
DNYGTTGACYWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY25_colamp_a 		0.825 0.670
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10013781m WRKY 633 689
Ciclev10013781m WRKY 807 864

Links

Other WRKY family TFs
Other Citrus clementina TFs

784 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000001516 Ailuropoda melanoleuca ENSAMEG00000001516 I
Alligator_sinensis_CCG016013.1 Alligator sinensis Alligator_sinensis_CCG016013.1 I
ENSAPLG00000012296 Anas platyrhynchos ENSAPLG00000012296 I
FOXI1 Anolis carolinensis ENSACAG00000015950 I
Afo_R011902 Aptenodytes forsteri Afo_R011902 I
ENSAMXG00000005839 Astyanax mexicanus ENSAMXG00000005839 I
ENSAMXG00000008393 Astyanax mexicanus ENSAMXG00000008393 I
ENSAMXG00000012362 Astyanax mexicanus ENSAMXG00000012362 I
ENSBTAP00000050534-D2 Bos grunniens ENSBTAP00000050534-D2 I
FOXI1 Bos taurus ENSBTAG00000014620 I
Brh_R008138 Buceros rhinoceros Brh_R008138 I
FOXI1 Callithrix jacchus ENSCJAG00000011646 I
Aan_R013126 Calypte anna Aan_R013126 I
Aan_R007110 Calypte anna Aan_R007110 I
FOXI1 Canis familiaris ENSCAFG00000016968 I
CapteG154409 Capitella teleta CapteG154409 I
Cmyd_10020111 Chelonia mydas Cmyd_10020111 I
ENSCSAG00000010076 Chlorocebus sabaeus ENSCSAG00000010076 I
foxi-a Ciona intestinalis ENSCING00000007221 I
ENSCSAVG00000005989 Ciona savignyi ENSCSAVG00000005989 I
csin104676 Clonorchis sinensis csin104676 I
CGI_10019731 Crassostrea gigas CGI_10019731 I
foxi3a Danio rerio ENSDARG00000055926 I
foxi3b Danio rerio ENSDARG00000009550 I
FOXI1 Dasypus novemcinctus ENSDNOG00000007480 I
ECANG7_07925 Echinococcus canadensis ECANG7_07925 I
FOXI1 Felis catus ENSFCAG00000000835 I
ENSFALG00000009556 Ficedula albicollis ENSFALG00000009556 I
ENSGMOG00000001944 Gadus morhua ENSGMOG00000001944 I
FOXI1 Gallus gallus ENSGALG00000002105 I
foxi3a Gasterosteus aculeatus ENSGACG00000018474 I
Gfo_R011197 Geospiza fortis Gfo_R011197 I
FOXI1 Gorilla gorilla ENSGGOG00000015780 I
FOXI1 Homo sapiens ENSG00000168269 D
ENSSTOG00000016524 Ictidomys tridecemlineatus ENSSTOG00000016524 I
ISCW017832 Ixodes scapularis ISCW017832 I
ENSLACG00000017904 Latimeria chalumnae ENSLACG00000017904 I
FOXI1 Loxodonta africana ENSLAFG00000026591 I
ENSP00000304286 Macaca fascicularis ENSP00000304286 I
FOXI1 Macaca mulatta ENSMMUG00000014124 I
ENSMEUG00000000316 Macropus eugenii ENSMEUG00000000316 I
FOXI1 Meleagris gallopavo ENSMGAG00000002015 I
MCOS_0000744701 Mesocestoides corti MCOS_0000744701 I
FOXI1 Microcebus murinus ENSMICG00000012575 I
DI09_49p90 Microsporidia sp DI09_49p90 I
DI09_67p120 Microsporidia sp DI09_67p120 I
ML154122a Mnemiopsis leidyi ML154122a I
FOXI1 Monodelphis domestica ENSMODG00000006890 I
gw1.13.252.1 Mucor circinelloides gw1.13.252.1 I
e_gw1.1.1225.1 Mucor circinelloides e_gw1.1.1225.1 I
gw1.9.461.1 Mucor circinelloides gw1.9.461.1 I
ENSMPUG00000012982 Mustela putorius furo ENSMPUG00000012982 I
Foxi1 Mus musculus ENSMUSG00000047861 D
Myotis_brandtii_FOXI1_10007902 Myotis brandtii Myotis_brandtii_FOXI1_10007902 I
FOXI1 Myotis lucifugus ENSMLUG00000027832 I
ENSNLEG00000005109 Nomascus leucogenys ENSNLEG00000005109 I
Ogr15673 Ophisaurus gracilis Ogr15673 I
M896_121210 Ordospora colligata M896_121210 I
ENSONIG00000017618 Oreochromis niloticus ENSONIG00000017618 I
FOXI1 Oryctolagus cuniculus ENSOCUG00000000836 I
FOXI1 Otolemur garnettii ENSOGAG00000032689 I
ENSOARG00000003151 Ovis aries ENSOARG00000003151 I
FOXI1 Pan troglodytes ENSPTRG00000017514 I
ENSPANG00000013256 Papio anubis ENSPANG00000013256 I
ENSPSIG00000009562 Pelodiscus sinensis ENSPSIG00000009562 I
ENSPMAG00000009377 Petromyzon marinus ENSPMAG00000009377 I
fgeneshPB_pg.6__357 Phycomyces blakesleeanus fgeneshPB_pg.6__357 I
fgeneshPB_pg.18__185 Phycomyces blakesleeanus fgeneshPB_pg.18__185 N
estExt_fgeneshPB_pg.C_170198 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_170198 I
ENSPFOG00000015741 Poecilia formosa ENSPFOG00000015741 I
Pvit_09672 Pogona vitticeps Pvit_09672 I
ENSPPYG00000016029 Pongo abelii ENSPPYG00000016029 I
FOXI1 Procavia capensis ENSPCAG00000006657 I
PFL1_06663 Pseudozyma flocculosa PFL1_06663 I
FOXI1 Pteropus vampyrus ENSPVAG00000005974 I
Foxi1 Rattus norvegicus ENSRNOG00000006293 I
GLOINDRAFT_41548 Rhizophagus irregularis GLOINDRAFT_41548 I
GLOINDRAFT_82873 Rhizophagus irregularis GLOINDRAFT_82873 I
GLOINDRAFT_349666 Rhizophagus irregularis GLOINDRAFT_349666 I
RO3G_07238 Rhizopus oryzae RO3G_07238 I
ENSSHAG00000018578 Sarcophilus harrisii ENSSHAG00000018578 I
L889_g29810 Steinernema feltiae L889_g29810 I
FOXI1 Sus scrofa ENSSSCG00000017009 I
TASK_0000593301 Taenia asiatica TASK_0000593301 I
TsM_000087000 Taenia solium TsM_000087000 I
FOXI1 Taeniopygia guttata ENSTGUG00000001568 I
foxi3a Takifugu rubripes ENSTRUG00000007060 I
FOXJ3 Takifugu rubripes ENSTRUG00000014404 I
foxi3a Tetraodon nigroviridis ENSTNIG00000017058 I
FOXI1 Tupaia belangeri ENSTBEG00000000162 I
FOXI1 Tursiops truncatus ENSTTRG00000002178 I
Tal_R009461 Tyto alba Tal_R009461 I
foxi1.L Xenopus laevis XB-GENE-494129 I
foxi4.2.L Xenopus laevis XB-GENE-6252155 I
foxi4.2 Xenopus tropicalis XB-GENE-487658 I
foxi1 Xenopus tropicalis XB-GENE-494125 I
ENSXMAG00000010462 Xiphophorus maculatus ENSXMAG00000010462 I