CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_04145
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_04145
T357990_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_04145T0
Zinc cluster
45
85
LSCAACRVSKLKCDRSSPCGQCIRKGRPEACQYAPKPQRRK
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CHGG_04697
Chaetomium globosum
CHGG_04697
I
0.000
CGGC5_3069
Colletotrichum gloeosporioides
CGGC5_3069
N
0.000
GLRG_02919
Colletotrichum graminicola
GLRG_02919
I
0.000
CH063_02263
Colletotrichum higginsianum
CH063_02263
I
0.000
Cob_10631
Colletotrichum orbiculare
Cob_10631
N
0.000
CSUB01_03432
Colletotrichum sublineola
CSUB01_03432
N
0.000
DOTSEDRAFT_161080
Dothistroma septosporum
DOTSEDRAFT_161080
I
0.000
MPH_12582
Macrophomina phaseolina
MPH_12582
I
0.000
MGG_12339
Magnaporthe oryzae
MGG_12339
I
0.000
MYCTH_2298970
Myceliophthora thermophila
MYCTH_2298970
I
0.000
e_gw1.7.93.1
Mycosphaerella fijiensis
e_gw1.7.93.1
I
0.000
UCRNP2_10087
Neofusicoccum parvum
UCRNP2_10087
I
0.000
NCU07675
Neurospora crassa
NCU07675
D
0.000
estExt_Genewise1Plus.C_31316
Neurospora discreta
estExt_Genewise1Plus.C_31316
I
0.000
NEUTE1DRAFT_60106
Neurospora tetrasperma
NEUTE1DRAFT_60106
I
0.000
MYCFIDRAFT_34745
Pseudocercospora fijiensis
MYCFIDRAFT_34745
I
0.000
PTT_04142
Pyrenophora teres
PTT_04142
N
0.000
PTRG_03090
Pyrenophora triticirepentis
PTRG_03090
N
0.000
SMAC_00876
Sordaria macrospora
SMAC_00876
I
0.000
S40288_05338
Stachybotrys chartarum
S40288_05338
N
0.000
S40285_01002
Stachybotrys chlorohalonata
S40285_01002
N
0.000
TRIVIDRAFT_221632
Trichoderma virens
TRIVIDRAFT_221632
I
0.000