CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_05272
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_05272
T358007_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_05272T0
Zinc cluster
108
149
RPCDICRQRKTRCVREEGRDKCVMCTFHGQPCTYLRGPLPRK
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CFIO01_04267
Colletotrichum fioriniae
CFIO01_04267
N
0.659
GLRG_06945
Colletotrichum graminicola
GLRG_06945
N
0.658
Cob_11684
Colletotrichum orbiculare
Cob_11684
N
0.659
FFUJ_08283
Fusarium fujikuroi
FFUJ_08283
N
0.551
FGRRES_10914
Fusarium graminearum
FGRRES_10914
N
0.551
FOXG_12849
Fusarium oxysporum
FOXG_12849
N
0.551
FPSE_01374
Fusarium pseudograminearum
FPSE_01374
N
0.551
NechaG68965
Fusarium solani
NechaG68965
N
0.551
FVEG_11594
Fusarium verticillioides
FVEG_11594
N
0.551
MGG_04387
Magnaporthe oryzae
MGG_04387
N
0.579
estExt_Genewise1Plus.C_sca_12_chr5_2_00225
Nectria haematococca
estExt_Genewise1Plus.C_sca_12_chr5_2_00225
N
0.551
S40288_03578
Stachybotrys chartarum
S40288_03578
N
0.572
TRIVIDRAFT_21566
Trichoderma virens
TRIVIDRAFT_21566
N
0.544
VDBG_05272
Verticillium alfalfae
VDBG_05272
N
0.683
VDAG_06923
Verticillium dahliae
VDAG_06923
N
0.683