CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1Plus.C_sca_12_chr5_2_00225
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_Genewise1Plus.C_sca_12_chr5_2_00225
T389956_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_sca_12_chr5_2_00225
Zinc cluster
41
82
RPCDTCRVRKTRCVKEEGQFRCVLCTFHNQPCTFLRGPTPRQ
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FFUJ_08283
Fusarium fujikuroi
FFUJ_08283
N
0.683
FGRRES_10914
Fusarium graminearum
FGRRES_10914
N
0.683
FOXG_12849
Fusarium oxysporum
FOXG_12849
N
0.683
FPSE_01374
Fusarium pseudograminearum
FPSE_01374
N
0.683
FVEG_11594
Fusarium verticillioides
FVEG_11594
N
0.683
NechaG68965
Fusarium solani
NechaG68965
N
0.683
S40288_03578
Stachybotrys chartarum
S40288_03578
N
0.584
VDBG_05272
Verticillium albo atrum
VDBG_05272
N
0.551
VDAG_06923
Verticillium dahliae
VDAG_06923
N
0.551
VDBG_05272
Verticillium alfalfae
VDBG_05272
N
0.551
HMPREF1541_01855
Cyphellophora europaea
HMPREF1541_01855
N
0.549
F503_04718
Ophiostoma piceae uamh
F503_04718
N
0.540
AUEXF2481DRAFT_1504
Aureobasidium subglaciale
AUEXF2481DRAFT_1504
N
0.539
M437DRAFT_41932
Aureobasidium melanogenum
M437DRAFT_41932
N
0.538
M438DRAFT_353945
Aureobasidium pullulans
M438DRAFT_353945
N
0.538