CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_05705
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_05705
T358012_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_05705T0
Zinc cluster
9
46
KACKLCRSRRIKCDETKPACLKCAKANRVCPGYRDAFE
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART11G18640
Oryza barthii
OBART11G18640
N
OGLUM11G18070
Oryza glumaepatula
OGLUM11G18070
N
OLONG_013912
Oryza longistaminata
OLONG_013912
N
ONIVA11G18290
Oryza nivara
ONIVA11G18290
N