CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
VDBG_05705
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_05705
T358012_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_05705T0
Zinc cluster
9
46
KACKLCRSRRIKCDETKPACLKCAKANRVCPGYRDAFE
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_05705
Verticillium alfalfae
VDBG_05705
N
0.683
CGGC5_2716
Colletotrichum gloeosporioides
CGGC5_2716
N
0.631
CH063_09269
Colletotrichum higginsianum
CH063_09269
N
0.631
Cob_07244
Colletotrichum orbiculare
Cob_07244
N
0.631
CSUB01_09713
Colletotrichum sublineola
CSUB01_09713
N
0.631
GLRG_06241
Colletotrichum graminicola
GLRG_06241
N
0.631
CFIO01_03452
Colletotrichum fioriniae
CFIO01_03452
N
0.601
gw1.2.242.1
Cryphonectria parasitica
gw1.2.242.1
N
0.554