CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_10040
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_10040
T358079_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_10040T0
Zinc cluster
13
51
KACHNCRRRRLRCDRSYPSCHKCTTAGHECLGYGKLYKW
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Bb03235
Panicum virgatum
Pavir.Bb03235
N
Pavir.Ca02446
Panicum virgatum
Pavir.Ca02446
N
Pavir.Fa01175
Panicum virgatum
Pavir.Fa01175
N
Pavir.Ga01302
Panicum virgatum
Pavir.Ga01302
N
Pavir.Ha00557
Panicum virgatum
Pavir.Ha00557
N
Pavir.Ib01266
Panicum virgatum
Pavir.Ib01266
N
Pavir.J00899
Panicum virgatum
Pavir.J00899
N
Pavir.J08512
Panicum virgatum
Pavir.J08512
N
Pavir.J11932
Panicum virgatum
Pavir.J11932
N
Pavir.J13524
Panicum virgatum
Pavir.J13524
N
Pavir.J35510
Panicum virgatum
Pavir.J35510
N
Pavir.J36445
Panicum virgatum
Pavir.J36445
N
Pavir.J36563
Panicum virgatum
Pavir.J36563
N