CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_10040
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_10040
T358079_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_10040T0
Zinc cluster
13
51
KACHNCRRRRLRCDRSYPSCHKCTTAGHECLGYGKLYKW
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDAG_05342
Verticillium dahliae
VDAG_05342
N
0.683
VDBG_10040
Verticillium alfalfae
VDBG_10040
N
0.683
NechaG51752
Fusarium solani
NechaG51752
N
0.643
e_gw1.36.279.1
Nectria haematococca
e_gw1.36.279.1
N
0.643
S40285_08789
Stachybotrys chlorohalonata
S40285_08789
N
0.561
S40288_04757
Stachybotrys chartarum
S40288_04757
N
0.561
CSUB01_09286
Colletotrichum sublineola
CSUB01_09286
N
0.555
GLRG_06557
Colletotrichum graminicola
GLRG_06557
N
0.555
SNOG_10817
Stagonospora nodorum
SNOG_10817
N
0.547
CPUR_04654
Claviceps purpurea
CPUR_04654
N
0.547
PODANS_6_11340
Podospora anserina
PODANS_6_11340
N
0.540
ANIA_02367
Aspergillus nidulans
CADANIAG00009069
N
0.538
CFIO01_06836
Colletotrichum fioriniae
CFIO01_06836
N
0.537
Cob_11092
Colletotrichum orbiculare
Cob_11092
N
0.537