F503_05241 (Ophiostoma piceae uamh)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 F503_05241 T367113_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
clr-1
M02626_2.00 		Neurospora crassa
NNNHTCCGGAWNN
NNWTCCGGADNNN		 PBM
Weirauch et al.(2014)
pTH8805 		0.683 0.974
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EPE10146 Zinc cluster 148 185

Links

Other Zinc cluster family TFs
Other Ophiostoma piceae uamh TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold_200704.1 Arabidopsis lyrata scaffold_200704.1 I
BPC6 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8000489 I
BPC6 Arabidopsis thaliana AT5G42520 D
Bostr.3148s0250 Boechera stricta Bostr.3148s0250 I
Bo4g105160 Brassica oleracea Bo4g105160 I
Bo6g076850 Brassica oleracea Bo6g076850 I
Bo8g095020 Brassica oleracea Bo8g095020 I
Bra014504 Brassica rapa Bra014504 I
Bra003405 Brassica rapa Bra003405 I
Bra007518 Brassica rapa Bra007518 I
PK03443.1 Cannabis sativa PK03443.1 I
Cagra.9562s0001 Capsella grandiflora Cagra.9562s0001 I
Carubv10026720m.g Capsella rubella Carubv10026720m.g I
Cla022781 Citrullus lanatus Cla022781 I
Ciclev10001400m.g Citrus clementina Ciclev10001400m.g I
orange1.1g018368m.g Citrus sinensis orange1.1g018368m.g I
Cucsa.159750 Cucumis sativus Cucsa.159750 I
Eucgr.D01054 Eucalyptus grandis Eucgr.D01054 I
gene08483-v1.0-hybrid Fragaria vesca gene08483-v1.0-hybrid I
GLYMA06G02880 Glycine max GLYMA06G02880 I
GLYMA04G02860 Glycine max GLYMA04G02860 I
Gorai.002G124900 Gossypium raimondii Gorai.002G124900 I
Lus10012389.g Linum usitatissimum Lus10012389.g I
Lus10024313.g Linum usitatissimum Lus10024313.g I
chr1.CM0195.10.nd Lotus japonicus chr1.CM0195.10.nd I
MDP0000933138 Malus domestica MDP0000933138 I
MDP0000947167 Malus domestica MDP0000947167 I
cassava22532.valid.m1 Manihot esculenta cassava22532.valid.m1 I
MTR_1g023660 Medicago truncatula MTR_1g023660 I
Ocbimv22014894m.g Octopus bimaculoides Ocbimv22014894m.g I
POPTR_0005s25720 Populus trichocarpa POPTR_0005s25720 I
POPTR_0002s02820 Populus trichocarpa POPTR_0002s02820 I
Pm006246 Prunus mume Pm006246 I
PRUPE_ppa008316mg Prunus persica PRUPE_ppa008316mg I
30170.m014145 Ricinus communis 30170.m014145 I
SapurV1A.0025s0690 Salix purpurea SapurV1A.0025s0690 I
SapurV1A.0762s0100 Salix purpurea SapurV1A.0762s0100 I
Solyc04g081170.2 Solanum lycopersicum Solyc04g081170.2 I
PGSC0003DMG400003719 Solanum tuberosum PGSC0003DMG400003719 I
TCM_034171 Theobroma cacao TCM_034171 I
VIT_18s0001g13730 Vitis vinifera VIT_18s0001g13730 I