CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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G647_00099
(
Cladophialophora carrionii
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
G647_00099
T369035_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
vad-3
M02614_2.00
Neurospora crassa
NNNCGGCANWT
AWNTGCCGNNN
PBM
Weirauch et al.(2014)
pTH7811
0.660
0.949
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ETI27650
Zinc cluster
182
220
LACIACRRKKIRCSGEKPACKHCLRARIPCVYKVTTRKA
Links
Other
Zinc cluster
family TFs
Other
Cladophialophora carrionii
TFs
155 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_104540.1
Arabidopsis lyrata
scaffold_104540.1
I
0.000
AT1G49010
Arabidopsis thaliana
AT1G49010
D
0.000
Bostr.26675s0270
Boechera stricta
Bostr.26675s0270
I
0.000
Bo00685s060
Brassica oleracea
Bo00685s060
I
0.000
Bo6g018000
Brassica oleracea
Bo6g018000
I
0.000
Bra014169
Brassica rapa
Bra014169
I
0.000
PK19621.1
Cannabis sativa
PK19621.1
D
0.000
Cagra.1613s0002
Capsella grandiflora
Cagra.1613s0002
I
0.000
Carubv10009808m.g
Capsella rubella
Carubv10009808m.g
I
0.000
Ca_06612
Cicer arietinum
Ca_06612
I
0.000
Ciclev10021342m.g
Citrus clementina
Ciclev10021342m.g
I
0.000
Eucgr.K02659
Eucalyptus grandis
Eucgr.K02659
I
0.000
Thhalv10011650m.g
Eutrema salsugineum
Thhalv10011650m.g
I
0.000
Gorai.006G063000
Gossypium raimondii
Gorai.006G063000
I
0.000
MTR_4g111975
Medicago truncatula
MTR_4g111975
I
0.000
POPTR_0012s05720
Populus trichocarpa
POPTR_0012s05720
I
0.000
SapurV1A.0583s0020
Salix purpurea
SapurV1A.0583s0020
I
0.000
Solyc03g119740.2
Solanum lycopersicum
Solyc03g119740.2
I
0.000
TCM_012262
Theobroma cacao
TCM_012262
I
0.000