CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GGTG_00248
(
Gaeumannomyces graminis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
GGTG_00248
T369269_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01243
M02588_2.00
Neurospora crassa
NNNSCGN
NCGSNNN
PBM
Weirauch et al.(2014)
pTH8917
0.568
0.970
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GGTG_00248T0
Zinc cluster
603
638
RCQRCRKSKKGCDRQRPCGRCKDAGIPAELCISEDE
Links
Other
Zinc cluster
family TFs
Other
Gaeumannomyces graminis
TFs
145 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FRS10
Arabidopsis thaliana
AT5G28530
N
0.000
Cagra.13833s0001
Capsella grandiflora
Cagra.13833s0001
N
0.000
Carubv10000250m.g
Capsella rubella
Carubv10000250m.g
N
0.000
Ciclev10014481m.g
Citrus clementina
Ciclev10014481m.g
N
0.000
orange1.1g005579m.g
Citrus sinensis
orange1.1g005579m.g
N
0.000
Thhalv10003748m.g
Eutrema salsugineum
Thhalv10003748m.g
N
0.000
gene15606-v1.0-hybrid
Fragaria vesca
gene15606-v1.0-hybrid
N
0.000
Gorai.005G129200
Gossypium raimondii
Gorai.005G129200
N
0.000
FRS10
Populus trichocarpa
POPTR_0014s16500
N
0.000
PRUPE_ppa002284mg
Prunus persica
PRUPE_ppa002284mg
N
0.000
28859.m000324
Ricinus communis
28859.m000324
N
0.000
SapurV1A.0054s0360
Salix purpurea
SapurV1A.0054s0360
N
0.000
TCM_020251
Theobroma cacao
TCM_020251
N
0.000
FRS10
Vitis vinifera
VIT_12s0057g00960
N
0.000