KLTH0H05720g (Lachancea thermotolerans)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 KLTH0H05720g T371806_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
THI2
M08647_2.00 		Saccharomyces cerevisiae
NMNKNNNBNNBBNNNNCCGH
DCGGNNNNVVNNVNNNMNKN		 Misc
DeBoer et al.(2011)
YBR240C_1449 		0.586 0.821
THI2
M08467_2.00 		Saccharomyces cerevisiae
GGMAACYSWWAGARC
GYTCTWWSRGTTKCC		 COMPILED
Mathelier et al.(2014)
MA0407.1 		0.586 0.821
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CAR30266 Zinc cluster 13 51

Links

Other Zinc cluster family TFs
Other Lachancea thermotolerans TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_06135 Aegilops tauschii F775_06135 N 0.000
Bostr.19424s0744 Boechera stricta Bostr.19424s0744 N 0.000
BRADI1G45517 Brachypodium distachyon BRADI1G45517 N 0.000
Carubv10014420m.g Capsella rubella Carubv10014420m.g N 0.000
evm.TU.supercontig_62.23 Carica papaya evm.TU.supercontig_62.23 N 0.000
MLOC_76431 Hordeum vulgare MLOC_76431 N 0.000
LPERR06G05590 Leersia perrieri LPERR06G05590 N 0.000
MTR_3g101520 Medicago truncatula MTR_3g101520 N 0.000
mgf008645m Mimulus guttatus mgf008645m N 0.000
OB06G15600 Oryza brachyantha OB06G15600 N 0.000
ORGLA06G0055700 Oryza glaberrima ORGLA06G0055700 N 0.000
OGLUM06G06330 Oryza glumaepatula OGLUM06G06330 N 0.000
BGIOSGA022464 Oryza indica BGIOSGA022464 N 0.000
OLONG_013315 Oryza longistaminata OLONG_013315 N 0.000
ONIVA06G07020 Oryza nivara ONIVA06G07020 N 0.000
ORUFI06G06290 Oryza rufipogon ORUFI06G06290 N 0.000
OS06G0194400 Oryza sativa OS06G0194400 N 0.000
Pavir.Fb00845 Panicum virgatum Pavir.Fb00845 N 0.000
Pavir.J28012 Panicum virgatum Pavir.J28012 N 0.000
PRUPE_ppb024440mg Prunus persica PRUPE_ppb024440mg N 0.000
Si014404m.g Setaria italica Si014404m.g N 0.000
Sb06g028730 Sorghum bicolor Sb06g028730 N 0.000
Sb07g006170 Sorghum bicolor Sb07g006170 N 0.000
Sb03g026620 Sorghum bicolor Sb03g026620 N 0.000
Traes_7BS_9D1E05CB7 Triticum aestivum Traes_7BS_9D1E05CB7 N 0.000
Traes_7DS_A234A13E1 Triticum aestivum Traes_7DS_A234A13E1 N 0.000
TRIUR3_03303 Triticum urartu TRIUR3_03303 N 0.000
GRMZM2G173321 Zea mays GRMZM2G173321 N 0.000
GRMZM2G106673 Zea mays GRMZM2G106673 N 0.000