LACBIDRAFT_399488 (Laccaria bicolor)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 LACBIDRAFT_399488 T372139_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PGTG_09159
M02581_2.00 		Puccinia graminis
WTCGGRAN
NTYCCGAW		 PBM
Weirauch et al.(2014)
pTH7836 		0.540 0.795
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDR11520 Zinc cluster 86 126

Links

Other Zinc cluster family TFs
Other Laccaria bicolor TFs

95 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_22671 Aegilops tauschii F775_22671 N
BRADI1G29857 Brachypodium distachyon BRADI1G29857 N
BRADI1G76207 Brachypodium distachyon BRADI1G76207 N
MLOC_65456 Hordeum vulgare MLOC_65456 N
LPERR06G23420 Leersia perrieri LPERR06G23420 N
LPERR03G02450 Leersia perrieri LPERR03G02450 N
GSMUA_Achr5G19060_001 Musa acuminata GSMUA_Achr5G19060_001 N
GSMUA_Achr3G00560_001 Musa acuminata GSMUA_Achr3G00560_001 N
GSMUA_Achr3G14720_001 Musa acuminata GSMUA_Achr3G14720_001 N
OBART03G02630 Oryza barthii OBART03G02630 N
OBART03G02620 Oryza barthii OBART03G02620 N
OB03G12640 Oryza brachyantha OB03G12640 N
ORGLA03G0024300 Oryza glaberrima ORGLA03G0024300 N
ORGLA06G0236900 Oryza glaberrima ORGLA06G0236900 N
OGLUM03G02560 Oryza glumaepatula OGLUM03G02560 N
OGLUM06G29360 Oryza glumaepatula OGLUM06G29360 N
BGIOSGA020507 Oryza indica BGIOSGA020507 N
BGIOSGA011514 Oryza indica BGIOSGA011514 N
OLONG_016677 Oryza longistaminata OLONG_016677 N
OMERI03G02480 Oryza meridionalis OMERI03G02480 N
OMERI06G27920 Oryza meridionalis OMERI06G27920 N
ONIVA06G30950 Oryza nivara ONIVA06G30950 N
ONIVA03G02250 Oryza nivara ONIVA03G02250 N
OPUNC03G02420 Oryza punctata OPUNC03G02420 N
OPUNC06G25510 Oryza punctata OPUNC06G25510 N
ORUFI03G02380 Oryza rufipogon ORUFI03G02380 N
ORUFI06G29930 Oryza rufipogon ORUFI06G29930 N
OS03G0133000 Oryza sativa OS03G0133000 N
OS06G0726300 Oryza sativa OS06G0726300 N
Pavir.J24394 Panicum virgatum Pavir.J24394 N
Pavir.Ia04458 Panicum virgatum Pavir.Ia04458 N
Si006994m.g Setaria italica Si006994m.g N
Si036757m.g Setaria italica Si036757m.g N
Sb01g048130 Sorghum bicolor Sb01g048130 N
Sb10g030770 Sorghum bicolor Sb10g030770 N
Traes_4BL_27B9E4CE6 Triticum aestivum Traes_4BL_27B9E4CE6 N
Traes_4BL_8D44C3C97 Triticum aestivum Traes_4BL_8D44C3C97 N
Traes_4DL_7CB8EC5A8 Triticum aestivum Traes_4DL_7CB8EC5A8 N
Traes_4DL_B29067862 Triticum aestivum Traes_4DL_B29067862 N
TRIUR3_18560 Triticum urartu TRIUR3_18560 N
TRIUR3_18561 Triticum urartu TRIUR3_18561 I
TRIUR3_32216 Triticum urartu TRIUR3_32216 N
TRIUR3_33949 Triticum urartu TRIUR3_33949 N
GRMZM2G389557 Zea mays GRMZM2G389557 N
GRMZM2G059428 Zea mays GRMZM2G059428 N
GRMZM2G074358 Zea mays GRMZM2G074358 N
GRMZM2G126817 Zea mays GRMZM2G126817 N