CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PVAR5_4405
(
Byssochlamys spectabilis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PVAR5_4405
T382521_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GAD95759
Zinc cluster
28
62
VSCQTCRSKKLKCDRKQPCANCTARKISCIYGTGR
Links
Other
Zinc cluster
family TFs
Other
Byssochlamys spectabilis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGL55
Arabidopsis lyrata
fgenesh2_kg.2__370__AT1G60920.1
I
AGL56
Arabidopsis lyrata
fgenesh2_kg.2__374__AT1G60880.1
I
AGL56
Arabidopsis thaliana
AT1G60880
I
Bostr.10040s0123
Boechera stricta
Bostr.10040s0123
I
Bo9g043470
Brassica oleracea
Bo9g043470
I
Bo9g043530
Brassica oleracea
Bo9g043530
I
Bra027116
Brassica rapa
Bra027116
I
Bra040965
Brassica rapa
Bra040965
I
Carubv10021715m.g
Capsella rubella
Carubv10021715m.g
I
Thhalv10023813m.g
Eutrema salsugineum
Thhalv10023813m.g
I
Thhalv10023871m.g
Eutrema salsugineum
Thhalv10023871m.g
I