SMAC_00746 (Sordaria macrospora)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 SMAC_00746 T383913_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU06990
M02622_2.00 		Neurospora crassa
NYCGGNNN
NNNCCGRN		 PBM
Weirauch et al.(2014)
pTH8971 		0.630 0.946
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCC06719 Zinc cluster 208 247

Links

Other Zinc cluster family TFs
Other Sordaria macrospora TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_18168 Aegilops tauschii F775_18168 N
BRADI3G08280 Brachypodium distachyon BRADI3G08280 N
LPERR02G07820 Leersia perrieri LPERR02G07820 N
OGLUM02G09240 Oryza glumaepatula OGLUM02G09240 N
BGIOSGA006856 Oryza indica BGIOSGA006856 N
OMERI02G10300 Oryza meridionalis OMERI02G10300 N
ONIVA11G03290 Oryza nivara ONIVA11G03290 N
OPUNC06G17210 Oryza punctata OPUNC06G17210 N
OPUNC02G08070 Oryza punctata OPUNC02G08070 N
ORUFI02G09060 Oryza rufipogon ORUFI02G09060 N
OS02G0221100 Oryza sativa OS02G0221100 N
Pavir.J30600 Panicum virgatum Pavir.J30600 N
Pavir.J40109 Panicum virgatum Pavir.J40109 N
Si007981m.g Setaria italica Si007981m.g N
Si019540m.g Setaria italica Si019540m.g N
Sb04g007795 Sorghum bicolor Sb04g007795 N
Traes_6AS_4D5775944 Triticum aestivum Traes_6AS_4D5775944 N
TRIUR3_19577 Triticum urartu TRIUR3_19577 N
GRMZM2G340177 Zea mays GRMZM2G340177 N
GRMZM2G170559 Zea mays GRMZM2G170559 N