CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCU06990
(
Neurospora crassa
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
NCU06990
T390627_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06990
M02622_2.00
Neurospora crassa
NYCGGNNN
NNNCCGRN
PBM
Weirauch et al.(2014)
pTH8971
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02622_2.00
Zinc cluster
52
91
IACQRCRKSKIKCNNTGGDAPCDTCIRNGKQCIYPDVAPA
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU06990
Zinc cluster
197
236
IACQRCRKSKIKCNNTGGDAPCDTCIRNGKQCIYPDVAPA
Links
Other
Zinc cluster
family TFs
Other
Neurospora crassa
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMAC_00746
Sordaria macrospora
SMAC_00746
I
0.630
estExt_fgenesh2_pg.C_120234
Neurospora discreta
estExt_fgenesh2_pg.C_120234
I
0.630
CHGG_03973
Chaetomium globosum
CHGG_03973
I
0.610
MYCTH_2310172
Myceliophthora thermophila
MYCTH_2310172
I
0.610
THITE_2122500
Thielavia terrestris
THITE_2122500
I
0.610
CTHT_0037920
Chaetomium thermophilum
CTHT_0037920
I
0.579
FPSE_06240
Fusarium pseudograminearum
FPSE_06240
I
0.543
PODANS_1_23150
Podospora anserina
PODANS_1_23150
I
0.539