CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_fgenesh2_pg.C_120234
(
Neurospora discreta
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgenesh2_pg.C_120234
T389696_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06990
M02622_2.00
Neurospora crassa
NYCGGNNN
NNNCCGRN
PBM
Weirauch et al.(2014)
pTH8971
0.630
0.919
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_120234
Zinc cluster
330
369
IACQRCRKSKIKCNNTGGDAPCDTCIRNGKECVYPDVTPA
Links
Other
Zinc cluster
family TFs
Other
Neurospora discreta
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CHGG_03973
Chaetomium globosum
CHGG_03973
I
0.663
MYCTH_2310172
Myceliophthora thermophila
MYCTH_2310172
I
0.663
THITE_2122500
Thielavia terrestris
THITE_2122500
I
0.663
SMAC_00746
Sordaria macrospora
SMAC_00746
I
0.660
NCU06990
Neurospora crassa
NCU06990
D
0.630
CTHT_0037920
Chaetomium thermophilum
CTHT_0037920
I
0.585
PODANS_1_23150
Podospora anserina
PODANS_1_23150
I
0.569
CGGC5_414
Colletotrichum gloeosporioides
CGGC5_414
N
0.549