VDBG_01336 (Verticillium alfalfae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 VDBG_01336 T387457_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU08527
M02627_2.00 		Neurospora crassa
NKYCGGCGNNN
NNNCGCCGRMN		 PBM
Weirauch et al.(2014)
pTH8938 		0.549 0.744
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EEY15227 Zinc cluster 13 53

Links

Other Zinc cluster family TFs
Other Verticillium alfalfae TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCU08527 Neurospora crassa NCU08527 D 0.549
estExt_fgenesh3_pm.C_180042 Neurospora discreta estExt_fgenesh3_pm.C_180042 I 0.548
VDBG_01336 Verticillium albo atrum VDBG_01336 I 0.683
VDAG_07921 Verticillium dahliae VDAG_07921 I 0.681