VDBG_01341 (Verticillium alfalfae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 VDBG_01341 T387458_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANIA_00568
M01347_2.00 		Aspergillus nidulans
NRDWBSCCGV
BCGGSVWHYN		 PBM
Lambert et al.(2019)
pEX0204 		0.541 0.590
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EEY15232 Zinc cluster 20 58

Links

Other Zinc cluster family TFs
Other Verticillium alfalfae TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
mgf015862m Mimulus guttatus mgf015862m N 0.000
Solyc06g076280.1 Solanum lycopersicum Solyc06g076280.1 N 0.000
PGSC0003DMG401030325 Solanum tuberosum PGSC0003DMG401030325 N 0.000