CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc06g076280.1
(
Solanum lycopersicum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Solyc06g076280.1
T201567_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc06g076280.1.1
GRAS
374
746
LRTLLVSCAQSVAADDRRTAYEQLKQIRQHCSSIGDAYQRLASVFADGLEARLAGTGTQIYAALAPKKITAAEKLKAYQVYLSACPFKKISIFFANKMIFHTASNARTLHLIDFGILYGFQWPILIQLLSEIPDGPPKLRITGIDLPQPGFRPAESLEQTGSRLAKYCERFKVPFEYNAIATQNWENIKLEDLKLASGETVAVNCLFRFKNLLDETVMLDSPRDAVLGLIRKMNPDIFVQAVINGSYSAPFFVTRFREALFHYSTLFDMFDATLPRGDQKRLHFEQEFYRREAMNVIACEGSERVERPETYKQWQVRNMRAGFKILPLNQQLVQKLRCKVKAGYLRDFVFDEDGKWMLQGWKGRVVCASSCWV
Links
Other
GRAS
family TFs
Other
Solanum lycopersicum
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG401030325
Solanum tuberosum
PGSC0003DMG401030325
N
0.981
mgf010534m
Mimulus guttatus
mgf010534m
N
0.741
mgf015862m
Mimulus guttatus
mgf015862m
N
0.741
cassava19450.valid.m1
Manihot esculenta
cassava19450.valid.m1
N
0.711
PGSC0003DMG400002139
Solanum tuberosum
PGSC0003DMG400002139
N
0.710
evm.TU.supercontig_81.123
Carica papaya
evm.TU.supercontig_81.123
N
0.708
PRUPE_ppa003149mg
Prunus persica
PRUPE_ppa003149mg
N
0.705
Pm000719
Prunus mume
Pm000719
N
0.701
28650.m000191
Ricinus communis
28650.m000191
N
0.700