CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_02139
(
Verticillium alfalfae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
VDBG_02139
T387468_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEY16030
Zinc cluster
19
62
VACTRCRKRKIRCSGDPGDGLPCHNCKNAGAEPCQFLRVASQET
Links
Other
Zinc cluster
family TFs
Other
Verticillium alfalfae
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0003s01170
Populus trichocarpa
POPTR_0003s01170
N
POPTR_0003s01190
Populus trichocarpa
POPTR_0003s01190
N
POPTR_0003s01200
Populus trichocarpa
POPTR_0003s01200
N
POPTR_0003s01220
Populus trichocarpa
POPTR_0003s01220
N
POPTR_0003s01240
Populus trichocarpa
POPTR_0003s01240
N
POPTR_0074s00200
Populus trichocarpa
POPTR_0074s00200
N
SapurV1A.0310s0190
Salix purpurea
SapurV1A.0310s0190
N
SapurV1A.0310s0210
Salix purpurea
SapurV1A.0310s0210
N
SapurV1A.0647s0100
Salix purpurea
SapurV1A.0647s0100
N
SapurV1A.0893s0110
Salix purpurea
SapurV1A.0893s0110
N
SapurV1A.3003s0030
Salix purpurea
SapurV1A.3003s0030
N
SapurV1A.3015s0020
Salix purpurea
SapurV1A.3015s0020
N
SapurV1A.3015s0030
Salix purpurea
SapurV1A.3015s0030
N