GSM1 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YJL103C T388354_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GSM1
M00090_2.00		 Saccharomyces cerevisiae
DYYCCGGRRH
DYYCCGGRRH		 PBM
Badis et al.(2008)
YJL103C_4534		 (Direct) (Direct)
GSM1
M01583_2.00		 Saccharomyces cerevisiae
NCGGVVNNNN
NNNNBBCCGN		 PBM
Zhu et al.(2009)
Gsm1		 (Direct) (Direct)
GSM1
M08671_2.00		 Saccharomyces cerevisiae
NNHNBTCCGGAGNTWNNHNNN
NNNDNNWANCTCCGGAVNDNN		 Misc
DeBoer et al.(2011)
YJL103C_856		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00090_2.00 Zinc cluster 17 57
M01583_2.00 Zinc cluster 18 58

DNA Binding Domains

Protein ID Domain From To Sequence
YJL103C Zinc cluster 18 58

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
si:dkey-13n23.3 Danio rerio ENSDARG00000070465 N
si:ch211-226f6.1 Danio rerio ENSDARG00000094038 N
si:dkeyp-106c3.2 Danio rerio ENSDARG00000095549 N
si:dkeyp-106c3.2 Danio rerio ENSDARG00000096816 N
CABZ01007829.1 Danio rerio ENSDARG00000098767 N
si:dkey-5n7.2 Danio rerio ENSDARG00000102339 N
CR407590.1 Danio rerio ENSDARG00000102729 N
CABZ01002809.1 Danio rerio ENSDARG00000105078 N