RDR1 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YOR380W T388378_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RDR1
M00108_2.00		 Saccharomyces cerevisiae
DCGGRWN
NWYCCGH		 PBM
Badis et al.(2008)
RDR1_2112		 (Direct) (Direct)
RDR1
M01597_2.00		 Saccharomyces cerevisiae
NCGGRWNN
NNWYCCGN		 PBM
Zhu et al.(2009)
Rdr1		 (Direct) (Direct)
RDR1
M07535_2.00		 Saccharomyces cerevisiae
WGCGGAAN
NTTCCGCW		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0360.1		 (Direct) (Direct)
RDR1
M08694_2.00		 Saccharomyces cerevisiae
WTCCGCGGAR
YTCCGCGGAW		 Misc
DeBoer et al.(2011)
YOR380W_756		 (Direct) (Direct)
RDR1
M08695_2.00		 Saccharomyces cerevisiae
NNNNNNNNGCGGAWANNNNNB
VNNNNNTWTCCGCNNNNNNNN		 Misc
DeBoer et al.(2011)
YOR380W_843		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00108_2.00 Zinc cluster 17 53
M01597_2.00 Zinc cluster 18 54

DNA Binding Domains

Protein ID Domain From To Sequence
YOR380W Zinc cluster 18 54

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_219861 Agaricus bisporus AGABI2DRAFT_219861 N
M378DRAFT_185224 Amanita muscaria M378DRAFT_185224 N
BOTBODRAFT_167296 Botryobasidium botryosum BOTBODRAFT_167296 N
BOTBODRAFT_313454 Botryobasidium botryosum BOTBODRAFT_313454 N
CERSUDRAFT_119425 Ceriporiopsis subvermispora CERSUDRAFT_119425 N
CC1G_00448 Coprinopsis cinerea CC1G_00448 N
FOMPIDRAFT_1014780 Fomitopsis pinicola FOMPIDRAFT_1014780 N
GALMADRAFT_235669 Galerina marginata GALMADRAFT_235669 N
JAAARDRAFT_64792 Jaapia argillacea JAAARDRAFT_64792 N
K443DRAFT_672462 Laccaria amethystina K443DRAFT_672462 N
LACBIDRAFT_312031 Laccaria bicolor LACBIDRAFT_312031 N
Moror_1588 Moniliophthora roreri Moror_1588 N
PAXRUDRAFT_821636 Paxillus rubicundulus PAXRUDRAFT_821636 N
PHACADRAFT_49856 Phanerochaete carnosa PHACADRAFT_49856 N
PHLGIDRAFT_102139 Phlebiopsis gigantea PHLGIDRAFT_102139 N
PILCRDRAFT_818914 Piloderma croceum PILCRDRAFT_818914 N
PISMIDRAFT_653918 Pisolithus microcarpus PISMIDRAFT_653918 N
M404DRAFT_1007251 Pisolithus tinctorius M404DRAFT_1007251 N
PLEOSDRAFT_61458 Pleurotus ostreatus PLEOSDRAFT_61458 N
V565_041460 Rhizoctonia solani V565_041460 N
SCLCIDRAFT_1209855 Scleroderma citrinum SCLCIDRAFT_1209855 N
CY34DRAFT_753736 Suillus luteus CY34DRAFT_753736 N
M407DRAFT_69430 Tulasnella calospora M407DRAFT_69430 N