CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
e_gw1.82.71.1
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
e_gw1.82.71.1
T389510_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU05308
M02610_2.00
Neurospora crassa
CGGRNATA
TATNYCCG
PBM
Weirauch et al.(2014)
pTH9681
0.612
0.946
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.82.71.1
Zinc cluster
117
153
LSCHECVERKTKCDRGRPHCLACIKRQTECRYAHVAN
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M378DRAFT_113194
Amanita muscaria
M378DRAFT_113194
N
EURHEDRAFT_489019
Aspergillus ruber
EURHEDRAFT_489019
N
BOTBODRAFT_28335
Botryobasidium botryosum
BOTBODRAFT_28335
N
CNG01550
Cryptococcus neoformans
CNG01550
N
DACRYDRAFT_21034
Dacryopinax sp
DACRYDRAFT_21034
N
FOMPIDRAFT_1133696
Fomitopsis pinicola
FOMPIDRAFT_1133696
N
JAAARDRAFT_42073
Jaapia argillacea
JAAARDRAFT_42073
N
Moror_5596
Moniliophthora roreri
Moror_5596
N
PILCRDRAFT_814340
Piloderma croceum
PILCRDRAFT_814340
N
PIIN_01713
Piriformospora indica
PIIN_01713
I
PLEOSDRAFT_168663
Pleurotus ostreatus
PLEOSDRAFT_168663
N
PaG_02087
Pseudozyma aphidis
PaG_02087
N
PSEUBRA_SCAF3g03962
Pseudozyma brasiliensis
PSEUBRA_SCAF3g03962
N
PFL1_06181
Pseudozyma flocculosa
PFL1_06181
N
PHSY_000928
Pseudozyma hubeiensis
PHSY_000928
N
PHSY_002329
Pseudozyma hubeiensis
PHSY_002329
N
V565_012220
Rhizoctonia solani
V565_012220
N
V565_061160
Rhizoctonia solani
V565_061160
N
RHTO_06131
Rhodosporidium toruloides
RHTO_06131
N
SCHCODRAFT_233850
Schizophyllum commune
SCHCODRAFT_233850
N
sr11805
Sporisorium reilianum
sr11805
N
K437DRAFT_115767
Tilletiaria anomala
K437DRAFT_115767
N
UHOR_00811
Ustilago hordei
UHOR_00811
N
UM04099
Ustilago maydis
UM04099
N
UM05790
Ustilago maydis
UM05790
N
WALSEDRAFT_60515
Wallemia sebi
WALSEDRAFT_60515
N