CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCU05308
(
Neurospora crassa
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
NCU05308
T390608_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU05308
M02610_2.00
Neurospora crassa
CGGRNATA
TATNYCCG
PBM
Weirauch et al.(2014)
pTH9681
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02610_2.00
Zinc cluster
52
88
LSCFECVERKTKCDRGRPHCLACIKRQTECKYAHVAN
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU05308
Zinc cluster
276
312
LSCFECVERKTKCDRGRPHCLACIKRQTECKYAHVAN
Links
Other
Zinc cluster
family TFs
Other
Neurospora crassa
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMAC_01681
Sordaria macrospora
SMAC_01681
I
0.683
estExt_fgenesh2_pg.C_120136
Neurospora discreta
estExt_fgenesh2_pg.C_120136
I
0.683
PODANS_3_4010
Podospora anserina
PODANS_3_4010
I
0.654
CFIO01_09529
Colletotrichum fioriniae
CFIO01_09529
I
0.652
estExt_Genewise1.C_32477
Cryphonectria parasitica
estExt_Genewise1.C_32477
I
0.635
BBA_06902
Beauveria bassiana
BBA_06902
I
0.612
Cob_02853
Colletotrichum orbiculare
Cob_02853
I
0.612
CPUR_05349
Claviceps purpurea
CPUR_05349
I
0.612
F503_04451
Ophiostoma piceae uamh
F503_04451
I
0.612
FFUJ_04549
Fusarium fujikuroi
FFUJ_04549
I
0.612
FOXG_06378
Fusarium oxysporum
FOXG_06378
I
0.612
FPSE_07181
Fusarium pseudograminearum
FPSE_07181
I
0.612
FVEG_04228
Fusarium verticillioides
FVEG_04228
I
0.612
MAJ_02866
Metarhizium majus
MAJ_02866
I
0.612
MBR_01984
Metarhizium brunneum
MBR_01984
I
0.612
MGU_02665
Metarhizium guizhouense
MGU_02665
I
0.612
NechaG49895
Fusarium solani
NechaG49895
I
0.612
OIDMADRAFT_108168
Oidiodendron maius
OIDMADRAFT_108168
I
0.612
TRIATDRAFT_294558
Trichoderma atroviride
TRIATDRAFT_294558
I
0.612
TRIVIDRAFT_213406
Trichoderma virens
TRIVIDRAFT_213406
I
0.612
VHEMI00550
Torrubiella hemipterigena
VHEMI00550
I
0.612
X797_005973
Metarhizium robertsii
X797_005973
I
0.612
e_gw1.82.71.1
Nectria haematococca
e_gw1.82.71.1
I
0.612
CH063_07756
Colletotrichum higginsianum
CH063_07756
I
0.588
CSUB01_05661
Colletotrichum sublineola
CSUB01_05661
I
0.588
GLRG_07219
Colletotrichum graminicola
GLRG_07219
I
0.588
VDBG_01253
Verticillium albo atrum
VDBG_01253
I
0.585
VDAG_08009
Verticillium dahliae
VDAG_08009
I
0.585
VDBG_01253
Verticillium alfalfae
VDBG_01253
I
0.585
PFICI_05140
Pestalotiopsis fici
PFICI_05140
I
0.580
ACRE_065310
Acremonium chrysogenum
ACRE_065310
I
0.571
S40285_08437
Stachybotrys chlorohalonata
S40285_08437
I
0.554
S40288_04589
Stachybotrys chartarum
S40288_04589
I
0.554
BAUCODRAFT_122462
Baudoinia compniacensis
BAUCODRAFT_122462
I
0.549
GGTG_04125
Gaeumannomyces graminis
GGTG_04125
I
0.548
SBOR_0518
Sclerotinia borealis
SBOR_0518
I
0.548
SEPMUDRAFT_161432
Sphaerulina musiva
SEPMUDRAFT_161432
I
0.548
GMDG_01402
Pseudogymnoascus destructans
GMDG_01402
I
0.546
V499_08858
Pseudogymnoascus pannorum
V499_08858
I
0.546
SNOG_13376
Stagonospora nodorum
SNOG_13376
I
0.541
COCSADRAFT_146273
Bipolaris sorokiniana
COCSADRAFT_146273
I
0.541
SS1G_01905
Sclerotinia sclerotiorum
SS1G_01905
I
0.541