VDBG_01253 (Verticillium albo atrum)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 VDBG_01253 T357941_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU05308
M02610_2.00 		Neurospora crassa
CGGRNATA
TATNYCCG		 PBM
Weirauch et al.(2014)
pTH9681 		0.585 0.806
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VDBG_01253T0 Zinc cluster 90 125

Links

Other Zinc cluster family TFs
Other Verticillium albo atrum TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VDAG_08009 Verticillium dahliae VDAG_08009 I 0.683
VDBG_01253 Verticillium alfalfae VDBG_01253 I 0.683
CH063_07756 Colletotrichum higginsianum CH063_07756 I 0.609
CSUB01_05661 Colletotrichum sublineola CSUB01_05661 I 0.609
GLRG_07219 Colletotrichum graminicola GLRG_07219 I 0.609
ACRE_065310 Acremonium chrysogenum ACRE_065310 I 0.594
estExt_Genewise1.C_32477 Cryphonectria parasitica estExt_Genewise1.C_32477 I 0.587
BBA_06902 Beauveria bassiana BBA_06902 I 0.585
Cob_02853 Colletotrichum orbiculare Cob_02853 I 0.585
CPUR_05349 Claviceps purpurea CPUR_05349 I 0.585
F503_04451 Ophiostoma piceae uamh F503_04451 I 0.585
FFUJ_04549 Fusarium fujikuroi FFUJ_04549 I 0.585
FOXG_06378 Fusarium oxysporum FOXG_06378 I 0.585
FPSE_07181 Fusarium pseudograminearum FPSE_07181 I 0.585
FVEG_04228 Fusarium verticillioides FVEG_04228 I 0.585
MAJ_02866 Metarhizium majus MAJ_02866 I 0.585
MBR_01984 Metarhizium brunneum MBR_01984 I 0.585
MGU_02665 Metarhizium guizhouense MGU_02665 I 0.585
NechaG49895 Fusarium solani NechaG49895 I 0.585
OIDMADRAFT_108168 Oidiodendron maius OIDMADRAFT_108168 I 0.585
SMAC_01681 Sordaria macrospora SMAC_01681 I 0.585
TRIATDRAFT_294558 Trichoderma atroviride TRIATDRAFT_294558 I 0.585
TRIVIDRAFT_213406 Trichoderma virens TRIVIDRAFT_213406 I 0.585
VHEMI00550 Torrubiella hemipterigena VHEMI00550 I 0.585
X797_005973 Metarhizium robertsii X797_005973 I 0.585
e_gw1.82.71.1 Nectria haematococca e_gw1.82.71.1 I 0.585
estExt_fgenesh2_pg.C_120136 Neurospora discreta estExt_fgenesh2_pg.C_120136 I 0.585
NCU05308 Neurospora crassa NCU05308 D 0.585
S40285_08437 Stachybotrys chlorohalonata S40285_08437 I 0.578
S40288_04589 Stachybotrys chartarum S40288_04589 I 0.578
CFIO01_09529 Colletotrichum fioriniae CFIO01_09529 I 0.577
PFICI_05140 Pestalotiopsis fici PFICI_05140 I 0.577
SEPMUDRAFT_161432 Sphaerulina musiva SEPMUDRAFT_161432 I 0.574
SBOR_0518 Sclerotinia borealis SBOR_0518 I 0.571
GMDG_01402 Pseudogymnoascus destructans GMDG_01402 I 0.570
V499_08858 Pseudogymnoascus pannorum V499_08858 I 0.570
SNOG_13376 Stagonospora nodorum SNOG_13376 I 0.565
COCSADRAFT_146273 Bipolaris sorokiniana COCSADRAFT_146273 I 0.565
SS1G_01905 Sclerotinia sclerotiorum SS1G_01905 I 0.565
Bcin07g03570 Botrytis cinerea Bcin07g03570 N 0.557
LEMA_P116160.1 Leptosphaeria maculans LEMA_P116160.1 N 0.557
M437DRAFT_58098 Aureobasidium melanogenum M437DRAFT_58098 N 0.557
M438DRAFT_343903 Aureobasidium pullulans M438DRAFT_343903 N 0.557
AB05588.1 Alternaria brassicicola AB05588.1 N 0.557
PODANS_3_4010 Podospora anserina PODANS_3_4010 I 0.556
GGTG_04125 Gaeumannomyces graminis GGTG_04125 I 0.548
UCRNP2_9108 Neofusicoccum parvum UCRNP2_9108 N 0.547
GYMLUDRAFT_98786 Gymnopus luxurians GYMLUDRAFT_98786 I 0.538