CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_fgenesh1_pg.C_40211
(
Cochliobolus heterostrophus C5
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgenesh1_pg.C_40211
T389601_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_40211
Zinc cluster
443
481
TSCNACKTKKTKCDNTRPICQTCINKNRECFYPESATDE
Links
Other
Zinc cluster
family TFs
Other
Cochliobolus heterostrophus C5
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ecym_6355
Eremothecium cymbalariae
Ecym_6355
N
estExt_Genewise1Plus.C_120108
Phytophthora capsici
estExt_Genewise1Plus.C_120108
N
PITG_06978
Phytophthora infestans
PITG_06978
N
fgenesh_scip_prom.28083.2008
Phytophthora lateralis
fgenesh_scip_prom.28083.2008
N
F443_17044
Phytophthora parasitica
F443_17044
N
Phyra79954
Phytophthora ramorum
Phyra79954
N
Physo138756
Phytophthora sojae
Physo138756
N
maker-piw_contig_2350-fgenesh-gene-0.0
Pythium iwayamai
maker-piw_contig_2350-fgenesh-gene-0.0
N
AACERI_AaceriAFR081C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAFR081C
N