CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_sca_29_chr12_4_00173
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgenesh1_pg.C_sca_29_chr12_4_00173
T389652_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_sca_29_chr12_4_00173
Zinc cluster
15
52
TGCLTCRQRRKKCDEKSPVCGNCASVARECQWPSSKDM
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCC4DRAFT_137441
Bipolaris maydis
COCC4DRAFT_137441
N
0.547
COCMIDRAFT_94153
Bipolaris oryzae
COCMIDRAFT_94153
N
0.545
COCSADRAFT_324435
Bipolaris sorokiniana
COCSADRAFT_324435
N
0.547
COCVIDRAFT_95708
Bipolaris victoriae
COCVIDRAFT_95708
N
0.547
COCCADRAFT_105405
Bipolaris zeicola
COCCADRAFT_105405
N
0.547
CaO19.1227
Candida albicans
CaO19.1227
I
0.546
CaO19.8813
Candida albicans
CaO19.8813
I
0.546
e_gw1.9.820.1
Cochliobolus heterostrophus C5
e_gw1.9.820.1
N
0.547
PV10_04412
Exophiala mesophila
PV10_04412
N
0.545
PV06_10524
Exophiala oligosperma
PV06_10524
N
0.537
Z517_04525
Fonsecaea pedrosoi
Z517_04525
I
0.547
NechaG102141
Fusarium solani
NechaG102141
N
0.683
SETTUDRAFT_160687
Setosphaeria turcica
SETTUDRAFT_160687
N
0.547