estExt_fgenesh1_pg.C_sca_8_chr1_1_00138 (Nectria haematococca)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 estExt_fgenesh1_pg.C_sca_8_chr1_1_00138 T389658_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU05411
M02611_2.00 		Neurospora crassa
NNNYCCGGRHNNN
NNNDYCCGGRNNN		 PBM
Weirauch et al.(2014)
pTH9700 		0.555 0.700
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_sca_8_chr1_1_00138 Zinc cluster 35 74

Links

Other Zinc cluster family TFs
Other Nectria haematococca TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ADIR001850 Anopheles dirus ADIR001850 N 0.000
AMIN008765 Anopheles minimus AMIN008765 N 0.000
ASTEI11594 Anopheles stephensi ASTEI11594 N 0.000
ENSP00000216513-D1 Bos grunniens ENSP00000216513-D1 N 0.000
SNAPOd2T00003146001 Oikopleura dioica SNAPOd2T00003146001 N 0.000
PPAI009697 Phlebotomus papatasi PPAI009697 N 0.000
PXEA_0002543701 Protopolystoma xenopodis PXEA_0002543701 N 0.000