CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_sca_8_chr1_1_00138
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgenesh1_pg.C_sca_8_chr1_1_00138
T389658_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU05411
M02611_2.00
Neurospora crassa
NNNYCCGGRHNNN
NNNDYCCGGRNNN
PBM
Weirauch et al.(2014)
pTH9700
0.555
0.700
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_sca_8_chr1_1_00138
Zinc cluster
35
74
AACLTCRKRKTRCAGERPFCSTCTKNHHRCLGYPEEIKKE
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG98518
Fusarium solani
NechaG98518
I
0.683
CGGC5_12854
Colletotrichum gloeosporioides
CGGC5_12854
I
0.629
FGRRES_01638
Fusarium graminearum
FGRRES_01638
I
0.628
FPSE_09752
Fusarium pseudograminearum
FPSE_09752
I
0.628
MAC_05787
Metarhizium acridum
MAC_05787
I
0.606
MAJ_07700
Metarhizium majus
MAJ_07700
I
0.606
MAM_06565
Metarhizium album
MAM_06565
I
0.606
MANI_019125
Metarhizium anisopliae
MANI_019125
I
0.606
MBR_06676
Metarhizium brunneum
MBR_06676
I
0.606
MGU_09148
Metarhizium guizhouense
MGU_09148
I
0.606
VDAG_07704
Verticillium dahliae
VDAG_07704
I
0.606
X797_008956
Metarhizium robertsii
X797_008956
I
0.606
CFIO01_13633
Colletotrichum fioriniae
CFIO01_13633
I
0.605
CH063_01030
Colletotrichum higginsianum
CH063_01030
I
0.605
GLRG_10273
Colletotrichum graminicola
GLRG_10273
I
0.605
VHEMI01959
Torrubiella hemipterigena
VHEMI01959
I
0.605
ACRE_006880
Acremonium chrysogenum
ACRE_006880
I
0.602
FFUJ_01862
Fusarium fujikuroi
FFUJ_01862
I
0.598
FOXG_11065
Fusarium oxysporum
FOXG_11065
I
0.598
FVEG_09736
Fusarium verticillioides
FVEG_09736
I
0.598
TRIVIDRAFT_163322
Trichoderma virens
TRIVIDRAFT_163322
I
0.588
CMQ_6814
Grosmannia clavigera
CMQ_6814
I
0.579
PFICI_14901
Pestalotiopsis fici
PFICI_14901
I
0.578
Cob_08365
Colletotrichum orbiculare
Cob_08365
I
0.569
HMPREF1624_08666
Sporothrix schenckii
HMPREF1624_08666
N
0.561
SPBR_04045
Sporothrix brasiliensis
SPBR_04045
N
0.561
CPUR_06453
Claviceps purpurea
CPUR_06453
I
0.558
TRIATDRAFT_290379
Trichoderma atroviride
TRIATDRAFT_290379
I
0.558
F503_00471
Ophiostoma piceae uamh
F503_00471
I
0.556
NEUTE1DRAFT_102079
Neurospora tetrasperma
NEUTE1DRAFT_102079
I
0.555
SMAC_04150
Sordaria macrospora
SMAC_04150
I
0.555
estExt_Genewise1Plus.C_110569
Neurospora discreta
estExt_Genewise1Plus.C_110569
I
0.555
NCU05411
Neurospora crassa
NCU05411
D
0.555
TRIREDRAFT_70071
Trichoderma reesei
TRIREDRAFT_70071
I
0.542