CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cob_08365
(
Colletotrichum orbiculare
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
Cob_08365
T364476_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU05411
M02611_2.00
Neurospora crassa
NNNYCCGGRHNNN
NNNDYCCGGRNNN
PBM
Weirauch et al.(2014)
pTH9700
0.563
0.800
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENH82925
Zinc cluster
33
72
AACLTCRKRKTRCDGERPVCSTCTKNGHNCLGYNEVVEKK
Links
Other
Zinc cluster
family TFs
Other
Colletotrichum orbiculare
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CGGC5_12854
Colletotrichum gloeosporioides
CGGC5_12854
I
0.593
CMQ_6814
Grosmannia clavigera
CMQ_6814
I
0.581
MAC_05787
Metarhizium acridum
MAC_05787
I
0.577
MAJ_07700
Metarhizium majus
MAJ_07700
I
0.577
MANI_019125
Metarhizium anisopliae
MANI_019125
I
0.577
MBR_06676
Metarhizium brunneum
MBR_06676
I
0.577
MGU_09148
Metarhizium guizhouense
MGU_09148
I
0.577
X797_008956
Metarhizium robertsii
X797_008956
I
0.577
VDAG_07704
Verticillium dahliae
VDAG_07704
I
0.571
MAM_06565
Metarhizium album
MAM_06565
I
0.569
NechaG98518
Fusarium solani
NechaG98518
I
0.569
estExt_fgenesh1_pg.C_sca_8_chr1_1_00138
Nectria haematococca
estExt_fgenesh1_pg.C_sca_8_chr1_1_00138
I
0.569
CH063_01030
Colletotrichum higginsianum
CH063_01030
I
0.568
VHEMI01959
Torrubiella hemipterigena
VHEMI01959
I
0.568
F503_00471
Ophiostoma piceae uamh
F503_00471
I
0.567
SMAC_04150
Sordaria macrospora
SMAC_04150
I
0.566
NEUTE1DRAFT_102079
Neurospora tetrasperma
NEUTE1DRAFT_102079
I
0.563
estExt_Genewise1Plus.C_110569
Neurospora discreta
estExt_Genewise1Plus.C_110569
I
0.563
NCU05411
Neurospora crassa
NCU05411
D
0.563
CFIO01_13633
Colletotrichum fioriniae
CFIO01_13633
I
0.561
GLRG_10273
Colletotrichum graminicola
GLRG_10273
I
0.561
BBA_03452
Beauveria bassiana
BBA_03452
I
0.556
PFICI_14901
Pestalotiopsis fici
PFICI_14901
I
0.555
CTHT_0016110
Chaetomium thermophilum
CTHT_0016110
N
0.546
HMPREF1624_08666
Sporothrix schenckii
HMPREF1624_08666
N
0.540
SPBR_04045
Sporothrix brasiliensis
SPBR_04045
N
0.540