estExt_fgenesh1_pm.C_sca_18_chr2_1_00122 (Nectria haematococca)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 estExt_fgenesh1_pm.C_sca_18_chr2_1_00122 T389675_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NCU00017
M02582_2.00
Neurospora crassa
NDCGBNHNNN

NNNDNVCGHN
PBM
Weirauch et al.(2014)
pTH8351
0.570 0.711
ANIA_06846
M01390_2.00
Aspergillus nidulans
VTCGGYTA

TARCCGAB
PBM
Lambert et al.(2019)
pEX0258
0.552 0.447
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pm.C_sca_18_chr2_1_00122 Zinc cluster 11 48

Links

Other Zinc cluster family TFs
Other Nectria haematococca TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Alligator_sinensis_CCG004973.1 Alligator sinensis Alligator_sinensis_CCG004973.1 N
ACEP25962 Atta cephalotes ACEP25962 N
ENSP00000335044-D1 Bos grunniens ENSP00000335044-D1 N
ARID2 Bos taurus ENSBTAG00000011087 N
fgenesh2_pg.scaffold_503000011 Branchiostoma floridae fgenesh2_pg.scaffold_503000011 I
Cflo_11031--XP_001120115.1_APIME Camponotus floridanus Cflo_11031--XP_001120115.1_APIME N
ARID2 Canis familiaris ENSCAFG00000009335 N
Cmyd_10012613 Chelonia mydas Cmyd_10012613 N
ENSCSAG00000006749 Chlorocebus sabaeus ENSCSAG00000006749 N
ARID2 Dasypus novemcinctus ENSDNOG00000014939 N
ARID2 Equus caballus ENSECAG00000019032 N
ARID2 Felis catus ENSFCAG00000012831 N
Hsal_11764--XP_001120115.1_APIME Harpegnathos saltator Hsal_11764--XP_001120115.1_APIME N
ARID2 Homo sapiens ENSG00000189079 N
ISCW014107 Ixodes scapularis ISCW014107 N
ENSLACG00000005013 Latimeria chalumnae ENSLACG00000005013 N
LotgiG113173 Lottia gigantea LotgiG113173 I
ARID2 Loxodonta africana ENSLAFG00000004415 N
ENSMMUP00000020998 Macaca fascicularis ENSMMUP00000020998 N
ARID2 Macaca mulatta ENSMMUG00000015962 N
ARID2 Microcebus murinus ENSMICG00000001487 N
ARID2 Monodelphis domestica ENSMODG00000018527 N
Myotis_brandtii_ARID2_10029493 Myotis brandtii Myotis_brandtii_ARID2_10029493 N
ARID2 Myotis lucifugus ENSMLUG00000006908 N
NEMVEDRAFT_v1g122918 Nematostella vectensis NEMVEDRAFT_v1g122918 I
Ocbimv22031898m.g Octopus bimaculoides Ocbimv22031898m.g N
ENSOANG00000010834 Ornithorhynchus anatinus ENSOANG00000010834 N
ARID2 Oryctolagus cuniculus ENSOCUG00000013306 N
ARID2 Otolemur garnettii ENSOGAG00000024418 N
ENSPANG00000015334 Papio anubis ENSPANG00000015334 N
ARID2 Pteropus vampyrus ENSPVAG00000009834 N
O9G_004738 Rozella allomycis O9G_004738 I
Sakowv30024145m.g Saccoglossus kowalevskii Sakowv30024145m.g N
ARID2 Sorex araneus ENSSARG00000007415 N
SPU_026159 Strongylocentrotus purpuratus SPU_026159 N
ENSSSCG00000030685 Sus scrofa ENSSSCG00000030685 N
TriadG51266 Trichoplax adhaerens TriadG51266 I
Tal_R007164 Tyto alba Tal_R007164 N
ARID2 Vicugna pacos ENSVPAG00000004779 N
ENSXMAG00000006636 Xiphophorus maculatus ENSXMAG00000006636 N