CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pm.C_sca_18_chr2_1_00122
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgenesh1_pm.C_sca_18_chr2_1_00122
T389675_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU00017
M02582_2.00
Neurospora crassa
NDCGBNHNNN
NNNDNVCGHN
PBM
Weirauch et al.(2014)
pTH8351
0.570
0.711
ANIA_06846
M01390_2.00
Aspergillus nidulans
VTCGGYTA
TARCCGAB
PBM
Lambert et al.(2019)
pEX0258
0.552
0.447
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pm.C_sca_18_chr2_1_00122
Zinc cluster
11
48
TGCLTCKSRKVKCDEAWPKCKRCTSTGRTCDGYRPPPV
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG004973.1
Alligator sinensis
Alligator_sinensis_CCG004973.1
N
ACEP25962
Atta cephalotes
ACEP25962
N
ENSP00000335044-D1
Bos grunniens
ENSP00000335044-D1
N
ARID2
Bos taurus
ENSBTAG00000011087
N
fgenesh2_pg.scaffold_503000011
Branchiostoma floridae
fgenesh2_pg.scaffold_503000011
I
Cflo_11031--XP_001120115.1_APIME
Camponotus floridanus
Cflo_11031--XP_001120115.1_APIME
N
ARID2
Canis familiaris
ENSCAFG00000009335
N
Cmyd_10012613
Chelonia mydas
Cmyd_10012613
N
ENSCSAG00000006749
Chlorocebus sabaeus
ENSCSAG00000006749
N
ARID2
Dasypus novemcinctus
ENSDNOG00000014939
N
ARID2
Equus caballus
ENSECAG00000019032
N
ARID2
Felis catus
ENSFCAG00000012831
N
Hsal_11764--XP_001120115.1_APIME
Harpegnathos saltator
Hsal_11764--XP_001120115.1_APIME
N
ARID2
Homo sapiens
ENSG00000189079
N
ISCW014107
Ixodes scapularis
ISCW014107
N
ENSLACG00000005013
Latimeria chalumnae
ENSLACG00000005013
N
LotgiG113173
Lottia gigantea
LotgiG113173
I
ARID2
Loxodonta africana
ENSLAFG00000004415
N
ENSMMUP00000020998
Macaca fascicularis
ENSMMUP00000020998
N
ARID2
Macaca mulatta
ENSMMUG00000015962
N
ARID2
Microcebus murinus
ENSMICG00000001487
N
ARID2
Monodelphis domestica
ENSMODG00000018527
N
Myotis_brandtii_ARID2_10029493
Myotis brandtii
Myotis_brandtii_ARID2_10029493
N
ARID2
Myotis lucifugus
ENSMLUG00000006908
N
NEMVEDRAFT_v1g122918
Nematostella vectensis
NEMVEDRAFT_v1g122918
I
Ocbimv22031898m.g
Octopus bimaculoides
Ocbimv22031898m.g
N
ENSOANG00000010834
Ornithorhynchus anatinus
ENSOANG00000010834
N
ARID2
Oryctolagus cuniculus
ENSOCUG00000013306
N
ARID2
Otolemur garnettii
ENSOGAG00000024418
N
ENSPANG00000015334
Papio anubis
ENSPANG00000015334
N
ARID2
Pteropus vampyrus
ENSPVAG00000009834
N
O9G_004738
Rozella allomycis
O9G_004738
I
Sakowv30024145m.g
Saccoglossus kowalevskii
Sakowv30024145m.g
N
ARID2
Sorex araneus
ENSSARG00000007415
N
SPU_026159
Strongylocentrotus purpuratus
SPU_026159
N
ENSSSCG00000030685
Sus scrofa
ENSSSCG00000030685
N
TriadG51266
Trichoplax adhaerens
TriadG51266
I
Tal_R007164
Tyto alba
Tal_R007164
N
ARID2
Vicugna pacos
ENSVPAG00000004779
N
ENSXMAG00000006636
Xiphophorus maculatus
ENSXMAG00000006636
N