CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh3_pm.C_60496
(
Neurospora discreta
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgenesh3_pm.C_60496
T389723_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
aod-5
M02602_2.00
Neurospora crassa
NNCGGRDNNN
NNNHYCCGNN
PBM
Weirauch et al.(2014)
pTH8816
0.683
1.000
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh3_pm.C_60496
Zinc cluster
73
113
RACYACQRAHLTCGDERPCQRCIKRGLAEACQDGVRKKAKY
Links
Other
Zinc cluster
family TFs
Other
Neurospora discreta
TFs
100 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MVLG_06281
Microbotryum violaceum
MVLG_06281
N
0.000
fgeneshPB_pg.26__26
Phycomyces blakesleeanus
fgeneshPB_pg.26__26
N
0.000
PSEUBRA_SCAF1g00537
Pseudozyma brasiliensis
PSEUBRA_SCAF1g00537
N
0.000
PFL1_04904
Pseudozyma flocculosa
PFL1_04904
N
0.000
PHSY_004928
Pseudozyma hubeiensis
PHSY_004928
N
0.000
PGTG_21257
Puccinia graminis
PGTG_21257
N
0.000
sr12243
Sporisorium reilianum
sr12243
N
0.000
CY34DRAFT_87735
Suillus luteus
CY34DRAFT_87735
N
0.000
UHOR_01423
Ustilago hordei
UHOR_01423
N
0.000
UM00946
Ustilago maydis
UM00946
N
0.000