fgenesh1_pg.sca_9_chr7_10_0000125 (Nectria haematococca)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 fgenesh1_pg.sca_9_chr7_10_0000125 T390306_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.sca_9_chr7_10_0000125 Zinc cluster 15 53

Links

Other Zinc cluster family TFs
Other Nectria haematococca TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_045_00179 Aquilegia coerulea Aquca_045_00179 N
APTX Arabidopsis lyrata fgenesh2_kg.6__80__AT5G01310.1 N
AT5G01305 Arabidopsis thaliana AT5G01305 N
Bostr.6251s0101 Boechera stricta Bostr.6251s0101 N
BRADI2G54030 Brachypodium distachyon BRADI2G54030 N
Bo2g001330 Brassica oleracea Bo2g001330 N
Bra028895 Brassica rapa Bra028895 N
Cagra.4082s0011 Capsella grandiflora Cagra.4082s0011 N
evm.TU.supercontig_120.27 Carica papaya evm.TU.supercontig_120.27 N
Ca_09396 Cicer arietinum Ca_09396 N
Cla018363 Citrullus lanatus Cla018363 N
Ciclev10013640m.g Citrus clementina Ciclev10013640m.g N
orange1.1g039972m.g Citrus sinensis orange1.1g039972m.g N
Cucsa.130030 Cucumis sativus Cucsa.130030 N
Thhalv10012562m.g Eutrema salsugineum Thhalv10012562m.g N
gene13480-v1.0-hybrid Fragaria vesca gene13480-v1.0-hybrid N
GLYMA01G30660 Glycine max GLYMA01G30660 N
GLYMA03G06792 Glycine max GLYMA03G06792 N
GLYMA0732S00200 Glycine max GLYMA0732S00200 N
GLYMA07G18651 Glycine max GLYMA07G18651 N
Gorai.012G117300 Gossypium raimondii Gorai.012G117300 N
MLOC_54157 Hordeum vulgare MLOC_54157 N
LPERR01G31030 Leersia perrieri LPERR01G31030 N
Lus10002213.g Linum usitatissimum Lus10002213.g N
Lus10003386.g Linum usitatissimum Lus10003386.g N
LjSGA_012662.1 Lotus japonicus LjSGA_012662.1 N
MDP0000178778 Malus domestica MDP0000178778 N
MDP0000436338 Malus domestica MDP0000436338 N
cassava41569.m1 Manihot esculenta cassava41569.m1 N
MTR_7g069590 Medicago truncatula MTR_7g069590 N
mg005373m Mimulus guttatus mg005373m N
GSMUA_Achr4G18820_001 Musa acuminata GSMUA_Achr4G18820_001 N
OBART01G36050 Oryza barthii OBART01G36050 N
ORGLA06G0253200 Oryza glaberrima ORGLA06G0253200 N
ORGLA01G0299600 Oryza glaberrima ORGLA01G0299600 N
OGLUM01G39950 Oryza glumaepatula OGLUM01G39950 N
BGIOSGA004736 Oryza indica BGIOSGA004736 N
OMERI01G33130 Oryza meridionalis OMERI01G33130 N
ONIVA01G41030 Oryza nivara ONIVA01G41030 N
OPUNC01G34850 Oryza punctata OPUNC01G34850 N
ORUFI01G39410 Oryza rufipogon ORUFI01G39410 N
LAX Oryza sativa OS01G0831000 N
Pavir.J06869 Panicum virgatum Pavir.J06869 N
Pavir.Ea03297 Panicum virgatum Pavir.Ea03297 N
POPTR_0016s12830 Populus trichocarpa POPTR_0016s12830 N
POPTR_0006s10350 Populus trichocarpa POPTR_0006s10350 N
PRUPE_ppa025490mg Prunus persica PRUPE_ppa025490mg N
SapurV1A.0001s0420 Salix purpurea SapurV1A.0001s0420 N
SapurV1A.0905s0090 Salix purpurea SapurV1A.0905s0090 N
Si004520m.g Setaria italica Si004520m.g N
Solyc09g005070.1 Solanum lycopersicum Solyc09g005070.1 N
Sb03g038820 Sorghum bicolor Sb03g038820 N
TCM_021641 Theobroma cacao TCM_021641 N
TRAES3BF030600030CFD_g Triticum aestivum TRAES3BF030600030CFD_g N
Traes_3B_D6EA106A51 Triticum aestivum Traes_3B_D6EA106A51 N
TRAES3BF030500010CFD_g Triticum aestivum TRAES3BF030500010CFD_g N
VIT_08s0058g00110 Vitis vinifera VIT_08s0058g00110 N
GRMZM2G397518 Zea mays GRMZM2G397518 N